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CellTypist

A tool for semi-automatic cell type classification, harmonization

...Harmonization, match and harmonize cell types defined by independent datasets. integration, integrate cell and cell types with supervision from harmonization. CellTypist recapitulates cell type structure and biology of independent datasets. Regularised linear models with Stochastic Gradient Descent provide a fast and accurate prediction. Scalable and flexible. Python-based implementation is easy to integrate into existing pipelines. A community-driven encyclopedia for cell types.

Downloads: 0 This Week

Last Update: 2025-06-25
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