Open Source Data Integration Tools - Page 4
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Data Integration Tools
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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Ship Agents FasterGemini Enterprise Agent Platform lets you rapidly build, scale, govern and optimize production-ready agents grounded in your organization's data. The platform enables developers to build custom or pre-built agents for virtually any use case. New customers get $300 in free credits.
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SnapLogic is an Open Source Data Integration framework that combines the power of state-of-the-art dynamic programming languages with standard Web interfaces to solve today's most pressing problems in data integration.
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Stanford Data Miner
Tools for integration and analysis of heterogeneous immunological data
An extensive description of this system is published in the Journal of Translational Medicine (http://www.translational-medicine.com/). In brief, the system consists of two main web applications, a data integration app and a data exploration app. The data integration app is a fully custom Java "Web 2.0" product called Sherpa. Sherpa uses Seam, a platform integrating Asynchronous JavaScript and XML (AJAX), JavaServer Faces (JSF), the Java Persistence API (JPA), and Enterprise Java Beans (EJB) 3.0. The data exploration app is an open source business intelligence product called JasperServer (version 3.7), customized through supported configuration changes. Both apps use MySQL for back-end data persistence. Currently, the documentation contained herein is not intended to provide comprehensive instructions on installing and configuring the system. Please contact a project administrator for more information. -
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A software to automate tasks, monitor and data integration in Windows systems, using a graphical interface.
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Interoperability enabling tools, for exchanging technical data between companies, or for internal data integration, alpha-numeric, 2D or 3D data. Compatible with ISO 15926 and expressed in ontology using RDF/OWL.
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Fully Managed MySQL, PostgreSQL, and SQL ServerCloud SQL handles your database ops end to end, so you can focus on your app.
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Steps for Kettle ( data integration by pentaho) to manage ( import and export ) TinyErp information.
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This project is to develop web applications and data integration functions to provide information on the collection records, ecology, geographic distribution, and taxonomic concepts of the vascular flora of the region.
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Tracking and reporting system for the processing, monitoring, and enforcement of permits issued by the Oklahoma State Department of Environmental Quality. Features web access, CDX gateway for the EPA, and an automatic document assembly system for Word.
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XIForge is a team of IT volunteer to explore new free open source technology framework and platform. We focus Pentaho and OpenBravo ERP. Our current hosted project includes Pentaho Data Integration Parse JSON String plugin. Team founder is Reid Lai.
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ZENBU is a data integration, data processing, and visualization web system based around three main web interfaces : an expression data enhanced genome browser interface, a secured user system for data upload and secured data sharing, and a data explorer interface to find and manipulate data across the many supported experimental data types and to find shared user configurations ZENBU is built as a web2.0 client/server application with javascript web clients and c++ server infrastructure.
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$300 Free Credits to Build on Google CloudStart your next project with $300 in free Google Cloud credit. Spin up VMs, run containers, query petabytes in BigQuery, or build agents with Gemini Enterprise Agent Platform. Once your credits are used, keep building with 20+ always-free tier products including Compute Engine, Cloud Storage, GKE, and Cloud Run functions. No commitment required—just sign up and start building.
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The Bio2RDF project aims to transforms silos of life science data into a globally distributed network of linked data for biological knowledge discovery. Bio2RDF creates and provides machine understandable descriptions of biological entities using the RDF/RDFS/OWL Semantic Web languages. Using both syntactic and semantic data integration techniques, Bio2RDF seamlessly integrates diverse biological data and enables powerful new SPARQL-based services across its globally distributed knowledge bases.
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data integration
Integration de données en utilisant Oracle
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di-date-dimension-plugin
Pentaho Data Integration plugin to supply to resolve date dimension
Pentaho Data Integration plugin to supply a function to resolve, and insert if it doesn't exist, the date dimension. It calculates all calendar data and you must supply the table info used to save the information. -
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di-history-join-plugin
Plugin for Pentaho Data Integration used to supply a method to join tw
This plugin supply a method to join two tables using the date-from and date-to history. It use the two dates that indicate the life of the record and join using a query (like the database join plugin) to resolve the record's story of the two entities. -
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harmonypy
Integrate multiple high-dimensional datasets with fuzzy k-means
Harmony is an algorithm for integrating multiple high-dimensional datasets. harmonypy is a port of the harmony R package by Ilya Korsunsky. Harmony is a general-purpose R package with an efficient algorithm for integrating multiple data sets. It is especially useful for large single-cell datasets such as single-cell RNA-seq. -
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incubator-seatunnel
SeaTunnel is a distributed, high-performance data integration platform for the synchronization and transformation of massive data (offline & real-time).
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nichenetr
NicheNet: predict active ligand-target links between interacting cells
nichenetr: the R implementation of the NicheNet method. The goal of NicheNet is to study intercellular communication from a computational perspective. NicheNet uses human or mouse gene expression data of interacting cells as input and combines this with a prior model that integrates existing knowledge on ligand-to-target signaling paths. This allows to predict ligand-receptor interactions that might drive gene expression changes in cells of interest. This model of prior information on potential ligand-target links can then be used to infer active ligand-target links between interacting cells. NicheNet prioritizes ligands according to their activity (i.e., how well they predict observed changes in gene expression in the receiver cell) and looks for affected targets with high potential to be regulated by these prioritized ligands. -
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optPBN
An optimization toolbox for probabilistic Boolean networks
We introduce optPBN, a Matlab-based toolbox for the optimization of probabilistic Boolean networks (PBN) which operates under the framework of the BN/PBN toolbox from Shmulevich et al. optPBN offers an easy generation of probabilistic Boolean networks from Boolean rule-based modeling and allows for flexible measurement data integration from multiple experiments and a subsequent integrated optimization problem generation which then can be solved with different optimizers. Thereby optPBN allows for the identification of Boolean functions in the model from a given set of candidate Boolean rules which can be applied for network inference study. In addition, it also permits the determination of selection probabilities of Boolean rules in PBNs which can be further used to determine the influence of parent nodes in biochemical interactions. -
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Ontology Representation and Data Integration (ORDI) is middleware framework to allow enterprise data integration via RDF-like data model.
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pdi-jira
JIRA plugin for Pentaho Data Integration
Using this PDI plugin you can connect any JIRA service even using SSL connection and perform JSON data extraction over the results. JQL is used to obtain data from the JIRA remote service. -
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rdi-exchange-prototype
Rights Exchange prototype from the Rights Data Integration project
Implementation in Java of a prototypical Rights Exchange as defined in the standards of the Linked Content Coalition (http://linkedcontentcoalition.org) and the Rights Data Integration project (http://www.rdi-project.org). Shows how to parse CRF-XML data containing Creation, Rights, RightsOffer, and Party data, to pose and respond to queries of a Hub, and to convert CRF-XML data into HTML for display. -
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reticulate
R Interface to Python
reticulate is an R package from Posit that creates seamless interoperability between R and Python. It lets you call Python modules, classes, and functions from within R, automatically translating between R and Python data structures. Useful for combining Python tooling with R projects, data analysis, and RMarkdown reports. -
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scArches
Reference mapping for single-cell genomics
Single-cell architecture surgery (scArches) is a package for reference-based analysis of single-cell data. scArches allows your single-cell query data to be analyzed by integrating it into a reference atlas. By mapping your data into an integrated reference you can transfer cell-type annotation from reference to query, identify disease states by mapping to healthy atlas, and advanced applications such as imputing missing data modalities or spatial locations. -
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simple dataspace management
Manage your data sources for data integration
For updates please check https://github.com/manzikki/dataspace/wiki