Search Results for "grep"

jq is like sed for JSON data - you can use it to slice, filter, map and transform structured data with the same ease that sed, awk, grep and friends let you play with text. jq is written in portable C, and it has zero runtime dependencies. You can download a single binary, scp it to a far away machine of the same type, and expect it to work. jq can mangle the data format that you have into the one that you want with very little effort, and the program to do so is often shorter and simpler than you'd expect. ...

...Either the X & Y intensities for creating cluster plots or Log R Ratio and B Allele Frequencies for CNV detection. Extracting the data for individual SNP/CNV markers or individual samples was slow grep/awk'ing the text files exported from the genotyping run (e.g. Illumina final report files). bint converts the text representation of the intensity float data to into a IEEE754 indexed binary file for rapid extraction of subsets of the data. In theory bint could be used for any large tables of float data.