Showing 88 open source projects for "tool"

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  • 1

    HBS-tools

    a set of tools for hairpin bisulfite-seq data analysis

    The emerging genome-wide hairpin bisulfite sequencing technique facilitates the determination of DNA methylation fidelity and accurate methylation calling. Here we present HBS analyzer, the first command line based open-source tool to process genome-wide hairpin bisulfite sequencing data. It accepts Illumina paired-end sequencing reads as input, performs alignment to recover the original (pre-bisulfite-converted) DNA sequences and calls methylation status for cytosines on both DNA strands.
    Downloads: 0 This Week
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  • 2
    QuickNXS

    QuickNXS

    Polarized ToF reflectivity raw data analysis tool

    Data evaluation tool for the magnetism reflectometer at the spallation neutron source (BL-4A@SNS). Reads raw nexus files (HDF5) of histogrammed or event mode data to create reflectivity curves and 2D Q-maps.
    Downloads: 1 This Week
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  • 3
    ETU SQL for MySQL

    ETU SQL for MySQL

    Powerful tool for data analysis and editing

    Changelog (Version 7 - Update 1) New Discard Partialy Changes New Edit Row in Window New List of User Connections New Show Image on Form New Quickly View of Cell Values Download also: 1) ETU SQL for MS SQL : https://sourceforge.net/projects/etusqltango/ 2) ETU SQL for Oracle: https://sourceforge.net/projects/etusqlfororacle/ 3) ETU SQL for DB2: https://sourceforge.net/projects/etusqlfordb2/ 4) ETU SQL for PostgreSQL: https://sourceforge.net/projects/etusqlforpostegresql/
    Downloads: 0 This Week
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  • 4
    ETU SQL for MS SQL Server

    ETU SQL for MS SQL Server

    Powerful tool for data analysis and editing

    Changelog (Version 7 - Update 1) New Discard Partialy Changes New Edit Row in Window New List of User Connections New Show Image on Form New Quickly View of Cell Values Download also : 1) ETU SQL for MySQL: https://sourceforge.net/projects/etusqlformysql/ 2) ETU SQL for Oracle: https://sourceforge.net/projects/etusqlfororacle/ 3) ETU SQL for DB2: https://sourceforge.net/projects/etusqlfordb2/ 4) ETU SQL for PostgreSQL: https://sourceforge.net/projects/etusqlforpostgreSQL/
    Downloads: 0 This Week
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  • 5

    ckon

    automatic build tool for ROOT data analysis software

    ckon is a C++ program/tool which automatically takes care of compilation, dictionary generation and linking of programs and libraries developed for data analyses within the CERN ROOT analysis framework. This includes parsing include headers to figure out which libraries the main programs need to be linked to. It uses automake/autoconf to be platform independent and GNU install compliant.
    Downloads: 0 This Week
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  • 6
    EyePro v3.0 (ergo)

    EyePro v3.0 (ergo)

    Award winning eye health monitoring and Work Stress reliever

    ...EyePro is a handy PC application that regularly reminds you to take “Short Breaks for your Eyes” with many exciting, customizable and Innovative features. It is an innovative tool done under the guidance of eminent Eye Doctors Who is Eye Pro for? Everyone who spends more than a 2 hours per day looking at a display. But especially People who spend ot of time in-front of PC, Employees with Computer related job environment, Students, Computer Professionals, will find the program particularly helpful. ...
    Downloads: 1 This Week
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  • 7

    fedtool

    Tool to aid factorial design analysis of in vitro experiments.

    Sets of colour-coded design templates for varying number of factors and replicates are included covering full factorial, and fractional factorial designs. An Excel-spreadsheet tool steps the user through specifying factor names and entering the design and data from the experiment. The tool deconvolutes the data into a matrix which can be pasted into data visualisation and / or data analysis software.
    Downloads: 0 This Week
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  • 8
    ETU SQL for PostgreSQL

    ETU SQL for PostgreSQL

    Powerful tool for data analysis and editing

    Changelog (Version 7 - Update 1) New Discard Partialy Changes New Edit Row in Window New List of User Connections New Show Image on Form New Quickly View of Cell Values Download also : 1) ETU SQL for MySQL: https://sourceforge.net/projects/etusqlformysql/ 2) ETU SQL for Oracle: https://sourceforge.net/projects/etusqlfororacle/ 3) ETU SQL for DB2: https://sourceforge.net/projects/etusqlfordb2/ 4) ETU SQL for MS SQL Server: https://sourceforge.net/projects/etusqltango/
    Downloads: 0 This Week
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  • 9
    ETU SQL for Oracle

    ETU SQL for Oracle

    Powerful tool for data analysis and editing

    Changelog (Version 7 - Update 1) New Discard Partialy Changes New Edit Row in Window New List of User Connections New Show Image on Form New Quickly View of Cell Values Download also: 1) ETU SQL for MS SQL : https://sourceforge.net/projects/etusqltango/ 2) ETU SQL for MySQL : https://sourceforge.net/projects/etusqlformysql/ 3) ETU SQL for DB2: https://sourceforge.net/projects/etusqlfordb2/ Damián Ezequiel Ortiz - 2014
    Downloads: 0 This Week
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  • 10
    ETU SQL for DB2

    ETU SQL for DB2

    Powerful tool for data analysis and editing

    Changelog (Version 7 - Update 1) New Discard Partialy Changes New Edit Row in Window New List of User Connections New Show Image on Form New Quickly View of Cell Values Download also : 1) ETU SQL for MySQL: https://sourceforge.net/projects/etusqlformysql/ 2) ETU SQL for Oracle: https://sourceforge.net/projects/etusqlfororacle/ 3) ETU SQL for MS SQL Server: https://sourceforge.net/projects/etusqltango/
    Downloads: 0 This Week
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  • 11
    Pathomx

    Pathomx

    Workflow-based data analysis built on IPython

    Pathomx is a workflow-based tool for the analysis and visualisation of experimental data. Initially created as a tool for metabolomic data analysis is has been extended and can now be used for any scientific and non-scientific data analysis.
    Downloads: 0 This Week
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  • 12
    Metis for Oracle
    A tool to support data-analysis on a Oracle-DB. In Greek mythology, Metis (Μῆτις) was of the Titan generation ... The Stoic commentators allegorized Metis as the embodiment of "wisdom" or "wise counsel" ... (from Wikipadia)
    Downloads: 0 This Week
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  • 13

    Gurmi - Real time data aggregation

    Real time data aggregation, analysis GUI Tool

    Gurmi project is an aggregate of data analysis tools. Will collect and analyze data in real-time output from the various types of equipment that shows the various forms of visulization. Gurmi project goal of the data collection, analysis, output is easy to use.
    Downloads: 0 This Week
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  • 14
    TOPS_CeMM

    TOPS_CeMM

    User Friendly Data Analysis Tool for Interaction Data

    TOPS provides the benchtop scientist with a free toolset to analyze, filter and visualize data from functional genomic gene-gene and gene-drug interaction screens with a flexible interface to accommodate various different technologies and analysis algorithms in addition to those already provided here.
    Downloads: 0 This Week
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  • 15

    eRNA

    A RNA data analysis tool

    eRNA: A RNA data analysis tool for high-throughput RNA sequencing experiments
    Downloads: 0 This Week
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  • 16

    BriPy

    A BRIC-seq data analysis package written in Python.

    ...It employs metabolic labeling by BrU of newly synthesized RNAs to chase chronological decreases of BrU-labeled RNA (Pulse-chase labeling), followed by immunoprecipitation with antibody for BrU, construction of cRNA library for High-throughput sequencing and computational data analysis. -What is BriPy? BriPy package is a BRIC-seq data analysis tool written in Python. It can calculate RNA half-life for each transcript and draw graphs describing the kinetics of RNA decay. In the future, it will provide several useful modules(e.g. calculating RPKM of each transcript from BAM file or ELAND output file). -Prerequisites To use BriPy package, you will need Python and the following extension packages. ...
    Downloads: 0 This Week
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  • 17
    Census2
    Census is a comprehensive cross-platform project manager and integration hub for NONMEM, the gold standard tool for model-based pharmacometric data analysis.
    Downloads: 0 This Week
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  • 18

    vonMises

    Package for dealing with the von Mises periodogram

    This is the package of C++ programs facilitating the practical use of the von Mises periodogram. The von Mises periodogram is a data-analysis period-search tool that models the periodic signal with the so-called von Mises function, K exp(nu cos x). The package can be used to compute the periodogram itself, as well as its detection significance levels. It can also perform some Monte Carlo simulations of the periodogram. The details of the theory are given in the following refereed paper: Baluev R.V., 2013, MNRAS, V. 431, P.1167-1179. ...
    Downloads: 0 This Week
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  • 19

    DHIS2 JDMart Offline tool

    Offline Data Analysis Tool

    This tool is designed to help users download data from their DHIS2 servers for use when they are offline.
    Downloads: 0 This Week
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  • 20
    ViStream (http://davis.wpi.edu/xmdv/downloads/) is a tool for the visual analysis of multivariate streaming data. It supports a number of computational data analysis methods and provides numerous visualizations and interactions for exploring dynamic data.
    Downloads: 0 This Week
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  • 21
    catcher(keylogger)

    catcher(keylogger)

    Catcher is a keylogger tool

    Catcher is free tool for everyone that needs a keylogger to their project. * A new catcher will not be released this year(2013). But scheduled early next year. *manny016 is busy at the moment. *Some issues are being fixed and testing for issues. *The new software's finished last march 2013 but it's being hold because of some personal issues. Thank You For Your Support Please Never Stop Waiting!!!
    Downloads: 0 This Week
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  • 22

    DMETANALYZER

    A tool for supporting pharmacogenomics data analysis

    We developed DMET-Analyzer a tool for the automatic association analysis among the variation of the patient genomes and the clinical conditions of patients, i.e. the different response to drugs. The proposed system allows: (i) to automatize the workflow of analysis of DMET-SNP data avoiding the use of multiple tools; (ii) the automatic annotation of DMET-SNP data and the search in existing databases of SNPs (e.g. dbSNP), (iii) the association of SNP with pathway through the search in PharmaKGB, a major knowledge base for pharmacogenomic studies. ...
    Downloads: 0 This Week
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  • 23

    GLMNB

    GLMNB: a shape-based peak calling tool for ChIP-Seq data analysis

    This is the beta-version of a shape-based peak calling tool for ChIP-Seq data analysis. It is built using Generalized Linear Model with Negative binomial distribution. This tool accounts for the common peak shape, local variability of peak shifting distance and negative binomial background noise.
    Downloads: 0 This Week
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  • 24
    EyeMap - Eye Movement Data Analyzer
    EyeMap is a visualization and analysis tool for text reading eye movement data. It can process Unicode, proportion/non-proportion and spaced/unspaced reading materials, which supports various languages and experiment methods.
    Downloads: 0 This Week
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  • 25
    ISOPLOT is a flexible software tool for the analysis and interpretation of radiogenic-isotope data. It is developed by Dr Ken Ludwig of the Berkeley Geochronology Center. DISCLAIMER: Isoplot is BGC’s Visual Basic Add-in for Microsoft’s Excel(R) for data analysis and graphical presentation of geochronology, earth science and other radiogenic isotope data only. BGC’s Isoplot is not the Isoplot(R) for analysis of any measuring system as described at http://www.shainin.com/.
    Downloads: 8 This Week
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