Search Results for "mondrian-3"
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Showing 51 open source projects for "mondrian-3"
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Cloud tools for web scraping and data extractionAutomate web data collection with cloud tools that handle anti-bot measures, browser rendering, and data transformation out of the box. Extract content from any website, push to vector databases for RAG workflows, or pipe directly into your apps via API. Schedule runs, set up webhooks, and connect to your existing stack. Free tier available, then scale as you need to.
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Datafor Visualization and Analysis
Visualization and Analysis
Datafor is a self-service agile BI tool that provides intuitive and user-friendly data visualization and analysis capabilities to help users quickly explore, analyze, and make decisions with their data. -
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elder-pt
data flow framework for data analysis applications
...Elder-Pt is the prototype of a framework, that facilitates the task of event-by-event data analysis. It provides: 1) a parser for textual graph description 2) an API to write processing nodes that will be used in the graph description for the graph 3) a set of frequently used processing nodes -
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PDP-OmniSim
PDP-OmniSim simulating parallel and distributed processing systems
PDP-OmniSim 🧬 Scientific Overview PDP-OmniSim is an advanced computational framework for simulating parallel and distributed processing systems, with cutting-edge applications in computational neuroscience, distributed computing, and complex systems modeling. The framework provides researchers with robust tools for large-scale simulations of networked systems and their emergent behaviors. 🎯 Key Scientific Contributions 🔬 Interdisciplinary Research Domains Computational... -
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hui
hewies user interface - 3D scientific visualisation tool
Python project with goal to provide FOSS library to extract, analyse and visualise data in a 3D fashion. The instance will connect to a data source, ods sheet, csv, sql DB, pyodbc the instance will analyse and/or transform the data to be presented to the visualisation functionality the instance will visualise the data in a 3D fashion, likely using third party FOSS -
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3Depict
atom probe software : visualisation and data analysis
This software is designed to help users visualize and analyze 3D point clouds with an associated real value, in a fast and flexible fashion. The primary use is in Atom Probe Tomography, which is an atomic imaging technique. However the program may also be useful in other areas, such as geospatial data, lidar, etc. -
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Reproducible-research
A Reproducible Data Analysis Workflow with R Markdown, Git, Make, etc.
...The workflow ensures meeting the primary goals that 1) the reporting of statistical results is consistent with the actual statistical results (dynamic report generation), 2) the analysis exactly reproduces at a later point in time even if the computing platform or software is changed (computational reproducibility), and 3) changes at any time (during development and post-publication) are tracked, tagged, and documented while earlier versions of both data and code remain accessible. -
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Poli
An easy-to-use BI server built for SQL lovers. Power data analysis
...Pixel-perfect positioning + Drag'n'Drop support to customize the reports and charts in your own way. Utilize the power of dynamic SQL with query variables to connect Filters and Charts. Capture the snapshot of historical data. Free up space in your own database. Three system level role configurations + Group based report access control. Custom the language pack and translations just for your audience. Auto refresh, drill through, fullscreen, embeds, color themes + more features in development. -
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OME-3DR
3D cell reconstruction and quantitative analysis based on OME data
...OME-3DR is well modularized (for automation, three main menus integrate hundreds of sub-functions), easy to use and ingenious; indeed, after setting the corresponding parameters, batch processing is relatively straightforward when beginning the 3D model reconstruction... -
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LaueTools
open source python packages for X-ray MicroLaue Diffraction analysis
LaueTools is an open-source project for white beam Laue x-ray microdiffraction data analysis including tools in image processing, peaks searching & indexing, crystal structure solving (orientation & strain) and data & grain mapping visualisation. Python 3 Code and new features are now at: https://gitlab.esrf.fr/micha/lauetools -
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RadiationHelper
Alpha, Beta, Gamma measurements and Nuclide exposure
RadiationHelper is a data analysis tool for : 1. gross alpha and beta radiation measurement and detector calibration using experimental data (counts acquired by alpha-beta devices). 2. gamma spectroscopy measurements and detector calibration using experimental data (spectra acquired by acquisition software such as Assayer, Gamma Vision, Maestro) 3. gross alpha,beta, gamma detector efficiencies and gamma peak efficiency can be theoretical computed using Monte-Carlo simulation technique for radiation transport (based on EGSnrc toolkit) 4.dose assessment in human body exposed to radiations from nuclides in several common scenarios such as air exposure, water submersion, ground surface, internal ingestion or inhalation. 5. quick dosimetry and shielding computations. ... -
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...hf5192 -) 3D elemental sensitive imaging using transmission X-ray microscopy, Analytical and Bioanalytical Chemistry, Volume 404, Issue 5, pp 1297-1301 (2012) http://link.springer.com/article/10.1007%2Fs00216-012-5818-9 -) Three-dimensional imaging of chemical phase transformations at the nanoscale with full-field transmission X-ray microscopy, Journal of Synchrotron Radiation, 18, 773-781. (2011) http://scripts.iucr.org/cgi-bin/paper?ie5055
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X-SOCS
X-ray Strain Orientation Calculation Software
The X-ray Strain Orientation Calculation Software (X-SOCS) is a user-friendly software, developed for automatic analysisof 5D sets of data recorded during continuous mapping measurements. X-SOCS aims at retrieving strain and tilt maps of nanostructures, films, surfaces or even embedded structures. For more information: http://scripts.iucr.org/cgi-bin/paper?S1600576714004506 To download the latest version of XSOCS (D. Naudet, T. Vincent, M.I. Richard, G. Chahine), follow the... -
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QuickRNASeq
A pipeline for large scale RNA-seq data analysis
...QuickRNASeq takes advantage of parallel computing resources, a careful selection of previously published algorithms for RNA-seq read mapping, counting and quality control, and a three-stage strategy to build a fully automated workflow. We also implemented built-in functionalities to detect sample swapping or mislabeling in large-scale RNA-seq studies. Our pipeline significantly lifts large-scale RNA-seq data analysis to the next level of automation and visualization. Please take a look at our test run project report and get a taste of its rich interactive visualization features. http://baohongz.github.io/QuickRNASeq QuickRNASeq user guide can be downloaded or is accessible online as well http://baohongz.github.io/QuickRNASeq/guide.html For more on QuickRNASeq, please see our paper http://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-015-2356-9 Enjoy QuickRNASeq -
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PMM-Lab
Predictive Microbial Modeling plug-in for KNIME
PMM-Lab is an open-source extension to the Konstanz Information Miner (KNIME). It consists of three components: • a library of KNIME nodes (called PMM-Lab), • a library of “standard” workflows • an HSQL database.to store experimental data and microbial models. Altogether these components are designed to ease and standardize the statistical analysis of experimental microbial data and the development of predictive microbial models (PMM). -
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SPRITE
Parallel SNP detection pipeline
SPRITE is an open-source software package providing a parallel implementation of the Single Nucleotide Polymorphisms (SNP) detection genomic data analysis workflow. It consists of three tools: PRUNE for read alignment, SAMPA for intermediate file processing, and PARSNIP for parallel SNP calling. -
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Open Cezeri Library
Effective Linear Algebra and Computer Vision Library with JAVA
...Currently, it holds following main concepts 1- Vision: It can access web cams, imaging source industrial cameras for manuel settings and advanced issues. Studies on accesing Leapmotion and Kinect is still under-development. 2- Machine learning: It uses Weka Software tool and some personel coded ML algorithms 3- CMatrix: Special matrix library called as CMatrix meaning Cezeri Maztrix Class. Actually it is regarded as the core of the OCL. CMatrix supports fluent interface and method chaining. -
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Perl OBD-II Logger
A Perl program for logging OBD-II PID data
The goal of the Perl OBD-II Logger project is to create a flexible and efficient application that can capture and log OBD-II Mode 0x01 PID data from an automotive scantool. It is designed with accurate and efficient PID data logging in mind, and provides NO support for reading or resetting diagnostic trouble codes. By default, the output log file contains time-stamped PID values in a simple Comma Separated Values (CSV) format that can be readily imported into popular data analysis or... -
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chipexo
model based analysis of ChIP-exo data
Here we developed a novel analysis framework named MACE (model-based analysis of ChIP-exo) dedicated to ChIP-exo data analysis. MACExo has the following four steps: 1) sequencing data normalization and bias correction; 2) signal consolidation and noise reduction; 3) single nucleotide resolution border detection using Chebyshev Inequality; and 4) border matching using Gale-Shapley’s stable matching algorithm. When applied to yeast Reb1 and human CTCF ChIP-exo data, MACE is able to define TFBSs with higher sensitivity, specificity and spatial resolution, as evidenced by multiple criteria, such as motif enrichment, sequence conservation, nucleosome positioning, and open chromatin states. -
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MICA-aligner
Next-generation sequencing short reads aligner based on Intel® MIC
...Experiments on aligning 150bp paired-end reads show that MICA using one MIC board is ~4.85 times faster than the CPU-(multi-core)-based BWA-MEM and about the same speed as the GPU-based SOAP3-dp. Furthermore, MICA’s simplicity allows very efficient scale-up when multiple MIC boards are used in a node (3 cards gives a 14-fold speedup over 6-core BWA-MEM). -
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ETU SQL for MySQL
Powerful tool for data analysis and editing
Changelog (Version 7 - Update 1) New Discard Partialy Changes New Edit Row in Window New List of User Connections New Show Image on Form New Quickly View of Cell Values Download also: 1) ETU SQL for MS SQL : https://sourceforge.net/projects/etusqltango/ 2) ETU SQL for Oracle: https://sourceforge.net/projects/etusqlfororacle/ 3) ETU SQL for DB2: https://sourceforge.net/projects/etusqlfordb2/ 4) ETU SQL for PostgreSQL: https://sourceforge.net/projects/etusqlforpostegresql/ -
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ETU SQL for PostgreSQL
Powerful tool for data analysis and editing
Changelog (Version 7 - Update 1) New Discard Partialy Changes New Edit Row in Window New List of User Connections New Show Image on Form New Quickly View of Cell Values Download also : 1) ETU SQL for MySQL: https://sourceforge.net/projects/etusqlformysql/ 2) ETU SQL for Oracle: https://sourceforge.net/projects/etusqlfororacle/ 3) ETU SQL for DB2: https://sourceforge.net/projects/etusqlfordb2/ 4) ETU SQL for MS SQL Server: https://sourceforge.net/projects/etusqltango/ -
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ETU SQL for Oracle
Powerful tool for data analysis and editing
Changelog (Version 7 - Update 1) New Discard Partialy Changes New Edit Row in Window New List of User Connections New Show Image on Form New Quickly View of Cell Values Download also: 1) ETU SQL for MS SQL : https://sourceforge.net/projects/etusqltango/ 2) ETU SQL for MySQL : https://sourceforge.net/projects/etusqlformysql/ 3) ETU SQL for DB2: https://sourceforge.net/projects/etusqlfordb2/ Damián Ezequiel Ortiz - 2014 -
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ETU SQL for DB2
Powerful tool for data analysis and editing
Changelog (Version 7 - Update 1) New Discard Partialy Changes New Edit Row in Window New List of User Connections New Show Image on Form New Quickly View of Cell Values Download also : 1) ETU SQL for MySQL: https://sourceforge.net/projects/etusqlformysql/ 2) ETU SQL for Oracle: https://sourceforge.net/projects/etusqlfororacle/ 3) ETU SQL for MS SQL Server: https://sourceforge.net/projects/etusqltango/ -
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ThermV
Comprehensive thermal analysis software package
ThermV thermal analysis software package aims to provide the most sophisticated automatic analysis of thermal analysis data (TG/DTG, DTA and DSC). It offers new algorithm for concurrent peak deconvolution at different heating rates and provides full kinetic analysis of these data, including isoconversional methods for Ea, determination of reaction model and full kinetic triplet, Avrami coefficients, and dimensionality of crystal growth for reactions in the solid state. The project is...
