Search Results for "computing"
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Showing 16 open source projects for "computing"
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dlib
Toolkit for making machine learning and data analysis applications
Dlib is a modern C++ toolkit containing machine learning algorithms and tools for creating complex software in C++ to solve real world problems. It is used in both industry and academia in a wide range of domains including robotics, embedded devices, mobile phones, and large high performance computing environments. Dlib's open source licensing allows you to use it in any application, free of charge. Good unit test coverage, the ratio of unit test lines of code to library lines of code is about 1 to 4. The library is tested regularly on MS Windows, Linux, and Mac OS X systems. No other packages are required to use the library, only APIs that are provided by an out of the box OS are needed. ... -
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LinDB
LinDB is a scalable, high performance, high availability database
LinDB is a scalable, high-performance, high-availability distributed time series database. A single server could easily support more than one million write TPS; With fundamental techniques like efficient compression storage and parallel computing, LinDB delivers highly optimized query performance. The multi-channel replication protocol supports any amount of nodes, and ensures the system's availability. Schema-free multi-dimensional data model with Metric, Tags, and Fields; The LinQL is flexible yet handy for real-time data analytics. Horizontal scalable is made simple by adding more new broker and storage nodes without too much thinking and manual operations. ... -
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StarRocks
StarRocks is a next-gen sub-second MPP database for full analytics
...From canceled orders to updated items, your analytics applications can easily handle them with StarRocks. From streaming data to change data capture, StarRocks meets the data ingestion demands of real-time analytics. Scale storage and computing power horizontally and support tens of thousands of concurrent users. All of your BI tools work with StarRocks through standard SQL. StarRocks provides superior performance. It is also a unified OLAP covering most data analytics scenarios. -
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LabPlot
Data Visualization and Analysis
LabPlot is a FREE, open source and cross-platform Data Visualization and Analysis software accessible to everyone. -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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Reproducible-research
A Reproducible Data Analysis Workflow with R Markdown, Git, Make, etc.
...The workflow ensures meeting the primary goals that 1) the reporting of statistical results is consistent with the actual statistical results (dynamic report generation), 2) the analysis exactly reproduces at a later point in time even if the computing platform or software is changed (computational reproducibility), and 3) changes at any time (during development and post-publication) are tracked, tagged, and documented while earlier versions of both data and code remain accessible. -
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Central Proteomics Facilities Pipeline
A data analysis pipeline for shotgun mass-spectrometry proteomics.
...However: * Limited fixes have been made on the main master branch by Phil Charles at the University of Oxford. * As of 2019, limited maintenance is being carried out by myself (now in the BioHPC high performance computing group at UTSW), to allow CPFP to install and run on RHEL 7 / CentOS 7, with updated TPP 5.1.0 and search tools. This updated code can be found in the utsw-biohpc branch of the git repository, and may become a 2.2.0 release if time and testing allows. -- David Trudgian - 2019/01/03 -
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Collaborative Computing Project for NMR
Collaborative Computing Project for NMR (CCPN)
The Collaborative Computational Project for NMR (CCPN) provides tools and knowledge to maximise the impact of the biological NMR studies. The CCPN software facilitates data analysis and software integration. The project actively promotes the exchange of knowledge and provides training and best practices for the NMR community. CCPN also has a leading role in the development of a NMR data-sharing standard and coordination of NMR instrumentation proposals for RCUK and BIS. The 28 partners of... -
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QuickRNASeq
A pipeline for large scale RNA-seq data analysis
We have implemented QuickRNASeq, an open-source based pipeline for large scale RNA-seq data analysis. QuickRNASeq takes advantage of parallel computing resources, a careful selection of previously published algorithms for RNA-seq read mapping, counting and quality control, and a three-stage strategy to build a fully automated workflow. We also implemented built-in functionalities to detect sample swapping or mislabeling in large-scale RNA-seq studies. Our pipeline significantly lifts large-scale RNA-seq data analysis to the next level of automation and visualization. ... -
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Perl OBD-II Logger
A Perl program for logging OBD-II PID data
...By default, the output log file contains time-stamped PID values in a simple Comma Separated Values (CSV) format that can be readily imported into popular data analysis or spreadsheet applications. (Output to an SQLite3 database file is also available). It is written in Perl, so it runs in any computing environment with a working Perl interpreter. The program supports scantools that are based on the ELM Electronics ELM327 or OBD Solutions STN1110 programmed microcontrollers. It has been tested with scantools using legacy RS-232 serial, serial over USB, and Bluetooth hardware interfaces. Perl OBD-II Logger even runs on the popular Raspberry Pi computer! -
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Lab Processes
Rediscover the Simplicity http://www.atgclabs.com/
...https://www.atgclabs.com/products/lp Lab Processes is a comprehensive and straightforward application specially designed for biologists and chemists who need to conduct a wide variety of tests and experiments on animals. Lab Processes requires minimal computing skills. Genetic and physiological data can be entered either manually or automatically when automated genotyping and analytical phenotypic assays are used. The Lab Processes application is web-based and completely customizable, with Animal Studies it is very simple to create, change and distribute data flows using an iterative approach. ... -
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A More Accurate Fourier Transform
Computes Accurate Fourier Transform via Explicit Integration not FFT
...It has been shown recently that EI methods can be more accurate than FFT methods (Courtney and Courtney, A More Accurate Fourier Transform) for scientific data analysis and that EI methods can be implemented in reasonable times with modern computing power. This project makes the source code (and command line Windows executable) developed in that study openly available for scientific and engineering uses. -
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Larch: Data Analysis for X-ray Spectra
Data Processing and Analysis for X-ray Spectroscopy and More
...Larch has been primarily developed for dealing with x-ray spectroscopic and scattering data, especially the kind of data collected at modern synchrotrons and x-ray sources. Larch is written in Python and relies heavily on the standard tools for scientific computing with Python (numpy, scipy, matplotlib, and h5py). -
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MolBioLib
C++11 framework for rapid develop and deploy of bioinformatic tasks.
...A central relational-database-like Table class is a flexible and powerful object to intuitively represent and work with a wide variety of tabular datasets, ranging from alignment data to annotations. MolBioLib includes programs to perform a wide variety of analysis tasks such as computing read coverage, annotating genomic intervals, and novel peak calling with a wavelet algorithm. While MolBioLib was designed primarily for bioinformatics purposes, much of its functionality is applicable to a wide range of problems. Complete documentation and an extensive automated test suite are provided. This package assumes fluency in both UNIX and C++. -
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Parallel Colt is a multithreaded version of Colt - a library for high performance scientific computing in Java. It contains efficient algorithms for data analysis, linear algebra, multi-dimensional arrays, Fourier transforms, statistics and histogramming
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Open Source Development of (SmartGrid) Data Analysis Platform based on OpenPDC and Cloud Computing Technology. * Source Codes - http://nephee.sourceforge.net, Main Project (Info, Planning, News) , http://nephee.or.kr, http://twitter.com/nepheer
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Java OpenCL Process Virtual Machine. Spring IoC based framework for complex data analysis with OpenCL computing.
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