Showing 71 open source projects for "development"

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  • 1

    PINCIS

    PINCIS.pl is a Perl bioinf. script to analyze PICS data

    PINCIS.pl (PIcs N-/C-terminal Inferred Substrates perl script) is a small, command line tool to designate and analyze PICS (Schilling et al., Nat. Protocols, 2011) data to gain the prime and non-prime site specificity of proteases. Thus, the script filters given peptide lists for library peptides (generated by the digestion protease in the proteomics workflow rather then the protease of interest) and prints out lists of inferred N- and C-terminal cleavage window extensions which can be...
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  • 2
    Reproducible-research

    Reproducible-research

    A Reproducible Data Analysis Workflow with R Markdown, Git, Make, etc.

    ...The workflow ensures meeting the primary goals that 1) the reporting of statistical results is consistent with the actual statistical results (dynamic report generation), 2) the analysis exactly reproduces at a later point in time even if the computing platform or software is changed (computational reproducibility), and 3) changes at any time (during development and post-publication) are tracked, tagged, and documented while earlier versions of both data and code remain accessible.
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  • 3
    DBSolveOptimum

    DBSolveOptimum

    The software for systems biology/pharmacology modeling

    ...In addition to the capabilities of these software packages, DBSolveOptimum is implemented with new tools for extended data analysis and multiple simulations, which are important for simulation of virtual clinical trials and application of modern modeling techniques, like quantitative systems pharmacology, to problems arising in drug research and development. By this time, DBSolveOptimum has been successfully tested and applied for the development and analysis of both systems pharmacology and conventional PK/PD models of drugs. It is free for academic and industrial use. http://www.ncbi.nlm.nih.gov/pubmed/20698988
    Downloads: 0 This Week
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  • 4
    Poli

    Poli

    An easy-to-use BI server built for SQL lovers. Power data analysis

    ...Three system level role configurations + Group based report access control. Custom the language pack and translations just for your audience. Auto refresh, drill through, fullscreen, embeds, color themes + more features in development.
    Downloads: 0 This Week
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  • 5

    TSA_CRAFT

    Automatic command line tool for TSA data analysis

    DSF is a high-throughput platform of TSA assay to screen various conditions that affect protein stability. To facilitate TSA data analysis, we developed an automatic tool "TSA-CRAFT". TSA-CRAFT was developed by integrating PERL script and Gnuplot. PERL scripts manage the entire workflow and data processing procedures of TSA data analysis. On the other hand, Gnuplot takes over the curve fitting and result presentation works. All analysed results are coded in an html file that can be easily...
    Downloads: 3 This Week
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  • 6
    OpenUnderwriter (Insurance Distribution)

    OpenUnderwriter (Insurance Distribution)

    Feature rich insurance quote & buy system for underwriters and brokers

    OpenUnderwriter is an open source software house specialising in the development of IT solutions for the insurance market. Specialists in the areas of eBusiness and component based development, the team has developed technology for a number of major insurance companies. The OpenUnderwriter platform has been collaboratively developed by some of the best technical brains in the Insurance Industry and offers a viable alternative to traditional solutions.
    Downloads: 5 This Week
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  • 7
    A shell for using the methods of Contextual Logic to do qualitative data analysis, mathematical research on the theory underlying Conceptual Knowledge Processing, or learning Formal Concept Analysis. It uses the framework provided by the Tockit project..
    Downloads: 0 This Week
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  • 8
    ProteoWizard
    ProteoWizard development moved to GitHub in 2018. The ProteoWizard Library is a set of software libraries and tools for rapid development of proteomics data analysis software. The libraries are cross-platform and built from the ground up using modern C++ techniques.
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    Downloads: 10 This Week
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  • 9

    Collaborative Computing Project for NMR

    Collaborative Computing Project for NMR (CCPN)

    ...The CCPN software facilitates data analysis and software integration. The project actively promotes the exchange of knowledge and provides training and best practices for the NMR community. CCPN also has a leading role in the development of a NMR data-sharing standard and coordination of NMR instrumentation proposals for RCUK and BIS. The 28 partners of CCPN jointly cover all aspects of biomolecular NMR and together they promote excellence in science in their respective fields.
    Downloads: 0 This Week
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  • 10

    hdxworkbench

    HD Exchange Data analysis

    HDX WORKBENCH IS AN INTEGRATED SOFTWARE PLATFORM DESIGNED SPECIFICALLY TO ENHANCE THE ANALYSIS OF HYDROGEN/DEUTERIUM EXCHANGE (HDX) MASS SPECTROMETRY DATA. BUILDING UPON THE EXPERIENCE FROM DEVELOPMENT OF THE DEUTERATOR AND HD DESKTOP, IT INTEGRATES TOOLS FOR DATA EXTRACTION WITH VISUALIZATION COMPONENTS WITHIN A SINGLE DESKTOP APPLICATION. THE SOFTWARE HAS BEEN DESIGNED TO BE A COMPREHENSIVE SOLUTION, AND EMPHASIS WAS PLACED ON ACHIEVING THREE MAIN GOALS OF INCREASED ANALYSIS SPEED; USER-FRIENDLY GRAPHIC INTERFACE; AND STRONG SUPPORT FOR LARGE HDX DATA SETS. ...
    Downloads: 0 This Week
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  • 11
    PMM-Lab

    PMM-Lab

    Predictive Microbial Modeling plug-in for KNIME

    ...It consists of three components: • a library of KNIME nodes (called PMM-Lab), • a library of “standard” workflows • an HSQL database.to store experimental data and microbial models. Altogether these components are designed to ease and standardize the statistical analysis of experimental microbial data and the development of predictive microbial models (PMM). Users can apply PMM-Lab to proprietary or public data and create bacterial growth / survival / inactivation models. The framework can easily be extended to other model types, e.g. growth/no-growth boundary models. PMM-Lab has been initiated and provided by the Federal Institute for Risk Assessment - BfR (Berlin, Germany). ...
    Downloads: 0 This Week
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  • 12
    CANStream

    CANStream

    An applicaton for CAN bus coms development, testing and validation

    CANStream is a .NET application intended to be used for CAN (Controller Area Network) bus communication development, testing and validation. CANStream allows to extensively test any system using CAN communication by sending and receiving CAN frames. Thanks to its powerful built-in mathematical expression evaluator, CANStream can also behave as a real control system feeding back the test device or commanding a third party device with context sensible data.
    Downloads: 0 This Week
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  • 13

    Pyclamp

    A Python package used to extract and analyse electrophysiological data

    ...A graphical user interface has been developed to allow a user to run the pack- age without requiring any knowledge of Python code. Presently, Pyclamp is designed to perform very specific forms of analysis on evoked synaptic responses: Data analysis (under development) : This is a highly user-interactive en-vironment that can be used to discriminate synaptic events, obtain various measures of their kinetics and size, and output the results. Quantal analysis : This part of the package performs simple variance-mean analysis and Bayesian quantal analysis to estimate the quantal sizea dn number of release sites among other measures.
    Downloads: 0 This Week
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  • 14
    Open Cezeri Library

    Open Cezeri Library

    Effective Linear Algebra and Computer Vision Library with JAVA

    ...Currently, it holds following main concepts 1- Vision: It can access web cams, imaging source industrial cameras for manuel settings and advanced issues. Studies on accesing Leapmotion and Kinect is still under-development. 2- Machine learning: It uses Weka Software tool and some personel coded ML algorithms 3- CMatrix: Special matrix library called as CMatrix meaning Cezeri Maztrix Class. Actually it is regarded as the core of the OCL. CMatrix supports fluent interface and method chaining.
    Downloads: 0 This Week
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  • 15
    Python(x, y)

    Python(x, y)

    Scientific-oriented Python Distribution based on Qt and Spyder

    Python(x,y) is a free scientific and engineering development software for numerical computations, data analysis and data visualization based on Python programming language, Qt graphical user interfaces and Spyder interactive scientific development environment.
    Downloads: 53 This Week
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  • 16

    ckon

    automatic build tool for ROOT data analysis software

    ckon is a C++ program/tool which automatically takes care of compilation, dictionary generation and linking of programs and libraries developed for data analyses within the CERN ROOT analysis framework. This includes parsing include headers to figure out which libraries the main programs need to be linked to. It uses automake/autoconf to be platform independent and GNU install compliant. In addition, m4 macros are automatically downloaded and the according compiler flags included based on a...
    Downloads: 0 This Week
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  • 17

    HEIMDALL

    High-End Interface for Monitoring & spatial Data Analysis using L2Norm

    HEIMDALL, short for High-End Interface for Monitoring and spatial Data Analysis using L2-Norm, is a set of public libraries written in JAVA which contains routines and algorithms for geodetic hardware connection. To observe objects (in general spatial points) continuous, HEIMDALL’s programmable logic arrays can be used to design monitoring systems. For data analysis an interface to the least-squares program JAG3D can be provided. The serial communication with e.g. inclination sensors,...
    Downloads: 0 This Week
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  • 18

    TrollEditor

    Editor of virtual worlds.

    Troll enables creation and visualisation of complex environments. It is based on Ogre3D (graphics engine), Bullet (physics engine), PhysX (physics engine), OpenAL (3D sound and music), OpenCV (image analysis and camera model) and Boost (threading and python binding). It uses Python for scripting, as well as built in simple scripting language. Some features: - built in multiplayer - incorporating data from different sensors (IMU, AHRS, Razer Hydra) - image server/client - built in...
    Downloads: 0 This Week
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  • 19
    neural network designer

    neural network designer

    a dbms for neural nets. Chatbots, DTrees, random forests, n-grams,...

    This project consists out of a windows based designer application and a library (that can run on multiple platforms, including android) together with several demo applications (including an MVC3 chatbot client and an android application). It is probably best compared to a database management system, but for neural networks instead of relational data. As such, the library is optimized for handling any type of data-size by using advanced streaming and caching algorithms. With the designer,...
    Downloads: 0 This Week
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  • 20
    q pipeline manager

    q pipeline manager

    q: integrated platform for pipeline configuration and management

    The q utility is a platform for creating and managing data analysis pipelines. It expands the value of your existing job scheduler - either Grid Engine or TORQUE PBS - through numerous functions that help you organize, submit, monitor, manage and share your informatics work. Data processing pipelines require high-level organization and parallelization of work to optimize resource utilization and decrease the time to results. q (from queue) allows complex job sequences to be efficiently...
    Downloads: 0 This Week
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  • 21
    TOPS_CeMM

    TOPS_CeMM

    User Friendly Data Analysis Tool for Interaction Data

    TOPS provides the benchtop scientist with a free toolset to analyze, filter and visualize data from functional genomic gene-gene and gene-drug interaction screens with a flexible interface to accommodate various different technologies and analysis algorithms in addition to those already provided here.
    Downloads: 0 This Week
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  • 22
    LoLChampStats

    LoLChampStats

    LoL Game Data Analysis

    LoL Champ Stats is a free application for collecting and analyzing your League of Legends game data. Currently, we support summoners on NA, EUW and EUWE, but have plans to expand to other regions as RIOT's API allows. Development is very active and I am always taking feature requests on top of what I already have planned. Constructive criticism is welcome! Feature Highlights: - Breakdown by Role, Side, Champion - Find your best solo queue allies and worst enemies - Omit troll and AFK games from stats collection for truly accurate data - Many more currently in development!
    Downloads: 0 This Week
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  • 23
    BGP Looking-glass

    BGP Looking-glass

    Open Source BGP Looking-glass

    ...A beneficial side-effect of collecting BGP routing information is the ability to track BGP updates/events local or remote(upstream). To analyze events Splunk is supported. A JSON/Socket API is currently under development. Custom graphs can be easily implemented if taken the time to do so. There's certainly no need to rely on Splunk if one developed another way of displaying data. This project is meant to be nothing more than a route collector, and it's interface is solely CLI(command line interface). This project does not have graph data "out of the box".
    Downloads: 0 This Week
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  • 24

    iAIDA

    iAIDA is a C++ implementation of the AIDA interfaces.

    iAIDA is an implementation in C++ of the AIDA Abstract Interfaces for Data Analysis, a set of interfaces designed for data analysis. Initially designed for use in experimental and theoretical physics, the AIDA interfaces can also be used in other fields.
    Downloads: 0 This Week
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  • 25

    Xross Tab / QScript

    Market Research Data Processing Suite

    XTCC/Qscript revolves around two concepts: 1) Data collection : Qscript 2) Data analysis : XTCC Qscript enables Market Research companies to securely collect data using online and offline mediums such as web, tablets/mobile. Different products include: 1) Pen and Paper Survey Management Qscript enables faster and easier keyboard entry with real time logic and validation. It generates SPSS and IBM Quantum compatible data tabulation programs leading to significant time savings of up...
    Downloads: 0 This Week
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