Showing 2 open source projects for "analyze"

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    Percona Toolkit

    Percona Toolkit

    A collection of advanced open source command-line tools

    Percona Toolkit is a collection of battle-tested command-line tools for MySQL and MariaDB that help diagnose performance, verify integrity, and perform online maintenance safely. Utilities such as pt-query-digest analyze slow logs and packet captures to surface hotspots and regressions, while pt-online-schema-change applies ALTERs with minimal blocking by copying and swapping tables. Consistency tools like pt-table-checksum and pt-table-sync detect and reconcile replication drift across replicas or shards. Other helpers find duplicate indexes, unused keys, skewed data distributions, and configuration issues that quietly erode performance. ...
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    PINCIS

    PINCIS.pl is a Perl bioinf. script to analyze PICS data

    PINCIS.pl (PIcs N-/C-terminal Inferred Substrates perl script) is a small, command line tool to designate and analyze PICS (Schilling et al., Nat. Protocols, 2011) data to gain the prime and non-prime site specificity of proteases. Thus, the script filters given peptide lists for library peptides (generated by the digestion protease in the proteomics workflow rather then the protease of interest) and prints out lists of inferred N- and C-terminal cleavage window extensions which can be concurrently used to generate cleavage specificity visualizations like the iceLogo (https://iomics.ugent.be/icelogoserver/create).
    Downloads: 0 This Week
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