Search Results for "perl"
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Showing 25 open source projects for "perl"
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Platypus
Create native Mac applications from command line scripts
Platypus is a developer tool that creates native Mac applications from command line scripts such as shell scripts or Python, Perl, Ruby, Tcl, JavaScript, and PHP programs. This is done by wrapping the script in an application bundle along with a slim app binary that runs the script. Platypus makes it easy to share scripts and programs with people who are unfamiliar with the command line interface. Native, user-friendly applications can be created with a few clicks. -
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Percona Toolkit
A collection of advanced open source command-line tools
Percona Toolkit is a collection of battle-tested command-line tools for MySQL and MariaDB that help diagnose performance, verify integrity, and perform online maintenance safely. Utilities such as pt-query-digest analyze slow logs and packet captures to surface hotspots and regressions, while pt-online-schema-change applies ALTERs with minimal blocking by copying and swapping tables. Consistency tools like pt-table-checksum and pt-table-sync detect and reconcile replication drift across... -
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csv2ldif2 is a command line tool written in perl that converts CSV files to LDIF files. Features: Platform independent, reads from STDIN and writes to STDOUT, ignoring/selecting specific fields of the CSV, choosing a custom base-dn and much more!
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inxi
inxi is a full featured CLI system information tool
Inxi is a powerful, full-featured command-line system information tool that aggregates hardware, software, and system metrics into a concise, human-readable format in terminal or IRC clients. Though development is archived, it remains available in many Linux/BSD repositories. Displays comprehensive system information including CPU, kernel version, uptime, memory, disk, processes, etc. Supports many command-line options (-A, -b, etc.) to customize output (audio, battery, network, etc.) Works... -
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MS-Helios
MS-Helios: A Circos wrapper to visualize multi-omic datasets
...To provide a more holistic view, we recently introduced circular proteome maps (CPMs). However, the CPM construction requires prior data transformation and extensive knowledge of the Perl-based tool, Circos. We present MS-Helios, an easy to use command line tool with multiple built-in data processing functions, allowing non-expert users to construct CPMs or in general terms circular plots with a non-genomic basis. MS-Helios automatically generates data and configuration files to create high quality and publishable circular plots with Circos. -
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PINCIS
PINCIS.pl is a Perl bioinf. script to analyze PICS data
PINCIS.pl (PIcs N-/C-terminal Inferred Substrates perl script) is a small, command line tool to designate and analyze PICS (Schilling et al., Nat. Protocols, 2011) data to gain the prime and non-prime site specificity of proteases. Thus, the script filters given peptide lists for library peptides (generated by the digestion protease in the proteomics workflow rather then the protease of interest) and prints out lists of inferred N- and C-terminal cleavage window extensions which can be concurrently used to generate cleavage specificity visualizations like the iceLogo (https://iomics.ugent.be/icelogoserver/create). -
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CSVfix
Command-line tool specifically designed to deal with CSV data
...Unfortunately, the CSV files you are given, or are required to produce, never seem to be in quite the right format for your particular business application. And because of the structure of CSV records, using standard text processing tools like sed, awk and perl is not as simple as it might be. Usage: http://csvfix.byethost5.com/csvfix15/csvfix.html?csvfix.html?Usage.html?i=1&i=2 CSVfix aims to provide a solution to these problems. It is a command-line stream editor specifically designed to deal with CSV data. With it you can, among other things: -
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ClustAGE is a command-line tool built using the Perl scripting language for the purpose of analyzing and comparing accessory genomic elements (AGEs) between genomes. It takes as input sets of AGE nucleotide sequences previously identified from the genome sequences of two or more separate organisms. These AGE sequence sets can be extracted from complete or draft whole-genome nucleotide sequences using the previously-developed software tools Spine (https://github.com/egonozer/Spine) and AGEnt (https://github.com/egonozer/AGEnt). ...
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TSA_CRAFT
Automatic command line tool for TSA data analysis
DSF is a high-throughput platform of TSA assay to screen various conditions that affect protein stability. To facilitate TSA data analysis, we developed an automatic tool "TSA-CRAFT". TSA-CRAFT was developed by integrating PERL script and Gnuplot. PERL scripts manage the entire workflow and data processing procedures of TSA data analysis. On the other hand, Gnuplot takes over the curve fitting and result presentation works. All analysed results are coded in an html file that can be easily displayed by a web browser. -
Fully Managed MySQL, PostgreSQL, and SQL ServerCloud SQL handles your database ops end to end, so you can focus on your app.
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sympaadmin
Command line utility for administering Sympa mailing lists.
sympaadmin is a command line tool for administrating sympa mailing lists from the terminal, making it suitable for use over SSH, for example. -
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SIGAR (System Information Gatherer and Reporter) is a cross-platform, cross-language library and command-line tool for accessing operating system and hardware level information in Java, Perl and .NET.
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A perlscript to build source code into programs, like make in purpose but without makefiles. Dynamically finds the dependencies at build time. Build in support for cross-platform programs, multi threaded compiling and distcc.
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flickrsync
Command line to to sync photos to Flickr
flickrsync is a command line tool written in Perl that aims to backup a complete directory structure to Flickr. It creates separate albums on Flickr based on the directory structure of the images. The main goal is to upload all pictures without requiring to move them to new folders. It relies on a few Perl packages mainly to handle HTTP requests and the file system. You should create Your own Flickr API keys, authentication token and add them to the application after You have downloaded it. -
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If you manage phylogenetic data, Bio::NEXUS can make your life easier with a library and ready-made tools to manipulate and visualize NEXUS files (see http://www.molevol.org/nexplorer and http://search.cpan.org/dist/Bio-NEXUS/doc/Tutorial.pod).
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brn is a Perl-based command-line tool designed to ease the task of bulk renaming a large number of files. Started as a fork of the standard perl 'rename' tool, this project has since mutated significantly and is still undergoing rapid flux.
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Pieman is a command-line tool for managing personal information such as appointments, contacts, and tasks as well as other data such as notes and rc files. It is a portable pure-perl tool inspired by abook, devtodo, mutt, and pal, among others.
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WatchProxy is a Perl-based command line tool for benchmarking HTTP proxies and comparing the performance of the proxy to direct website access.
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This is a command-line tool, written in perl, that will convert from any database supported by perl DBI that also supports the information_schema standard to a MySQL database. It was written to convert from SQL Server to MySQL.
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vmmonitor is a command line tool written in Perl used to monitor/locate VMware images in distributed environment. I am feeling great after using it to locate a VMware image. Try it!
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Command line tool 'subs' and its perl backend Subtitles.pm provide means for simple re-timing, joining, splitting, and format conversion of the subtitle files. Supported subtitle formats are .srt, .sub, .smi, and .idx.
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Oscar Notify is a small client<->server tool kit that implements the Oscar protocol. It allows you to connect to the ICQ/AIM network and use a small command line tool to send messages to a desired icq number. Works great with Nagios
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A command line tool that provides geographical information about a given IP address. The information/lookup is built-in (no online lookups by default) and very fast.
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