Search Results for "tool chains"

Capslock is a command-line tool for analyzing the capabilities of Go packages to reveal what privileged operations their code and dependencies can perform. Rather than detecting vulnerabilities, Capslock focuses on identifying capabilities — permissions implied by calls to sensitive or privileged standard library functions, such as file system access, networking, or process control. By following transitive call graphs, it classifies which security-sensitive operations each package can reach,...

A protein contact matrix is 2D representation of the distances between amino acid residues in a 3D protein structure. Protein Contact Map Generator (PCMGen) is a command line tool which takes protein 3D structures (PDB format files) as input and computes contact distances between two chains (from single or two different proteins). These matrix files can be further visualised as Contact Maps using other visualization tools/ programs (like R-heatmaps). Contact Maps can be used to understand proteins' : 1. ...