Search Results for "structural analysis software"

CRGREP searches for matching text in databases, various document formats, archives and other difficult to access resources. A command line tool for name and content text matching in database tables, plain files, MS Office documents, PDF, archives, MP3 audio, image meta-data, scanned documents, maven dependencies and web resources. CRGREP will search resources within resources of any arbitrary combination or depth, so text within a document within a zip archive, and so on. Here you...

FREJ stands for "Fuzzy Regular Expressions for Java" - it is a command-line tool and library which allow you easily compare strings with patterns disregarding nasty typos and considering several variants (like "Barack Obama", "B.H.Obama" etc.) Project sources are moved to github: https://github.com/RodionGork/FREJ

A protein contact matrix is 2D representation of the distances between amino acid residues in a 3D protein structure. Protein Contact Map Generator (PCMGen) is a command line tool which takes protein 3D structures (PDB format files) as input and computes contact distances between two chains (from single or two different proteins). These matrix files can be further visualised as Contact Maps using other visualization tools/ programs (like R-heatmaps). Contact Maps can be used to understand...

FNA is a command line tool for creating and analyzing financial networks with concepts developed in social network analysis and network science. NOTE: the project has been moved to http://code.google.com/p/financial-network-analyzer/