Search Results for "research"

...It also includes features such as background indexing to keep your search index up to date without interrupting your workflow and web search integration to expand the scope of queries beyond local files. Designed for both programmers and agents, it integrates naturally into development and research workflows while offering thoughtful defaults that keep output clean and informative.

The M6811 Code-Seeking Disassembler is a command-line tool that lets you enter known starting vectors for a given code image for the 6811 micro. It will disassemble the code and follow through branches to assist in the separation of code and data. Its companion Fuzzy Function Analyzer uses DNA Sequence Alignment Algorithms to locate similar code in multiple binaries, facilitating reverse-engineering. Originally written to analyze code from GM automotive engine controllers, but is...

A command-line tool for numerical reconstruction of digital holograms (formerly known as "HoloPlay")

The Systems Biology Results Markup Language is a language describing data. Unlike flat data formats, SBRML allows describing the origin of the data as well. This project hosts a library and tools for using SBRML.

ncclamp is a command-line tool for NetCDF files that allows you to replace values in-place for a variable given the old value to be replaced, the new value, and a comparison operator. The change is applied across all of the variable's dimensions.

Next generation sequencing has opened new avenues for sequencing prokaryotes which were difficult or either impossible to culture. Now, it is possible to sequence all organisms present in a metagenomic community. However, a critical problem is to determine the host organism for each genomic fragment present in the dataset. This project provides the computational tools for assigning the organismal identity for each genomic scaffold in the given dataset. For more detailed documentation...

dbf is an easy-to-use command line tool to show and convert the content of dBASE III, IV, and 5.0 files. It reads dBASE databases and prints the content to the screen or converts it to comma-separated (*.csv) files which can be opened in Excel, Calc.

Dynagraph is a cross-platform library and command-line tool for dynamically drawing graphs (networks, flowcharts, family trees, etc.) in reponse to continual modifications. Included are DynaDAG for directed graphs and FDP force-directed placement.

Alpha test of an XML based HDF reader

The SBML ODE Solver is a command-line tool and programming library (ISO/ANSI C) for construction and numerical integration of an ODE system, derived from an SBML based description of a biochemical reaction network. Development has moved to https://github.com/raim/SBML_odeSolver . Please download the latest version from there!

This is a small and fast library and command-line tool for manipulation of logic/boolean-algebra expressions, including proofing and simplification. A front-end using tigcc for Texas Instruments calculators is planned, too.

A command-line tool to convert polygon meshes to multi-triangulations

SymDiff is a little command line tool for symbolic differentiation and expression evaluation. Furthermore, the code can be used for the symbolical implementation of certain mathematical algorithms that require derivatives.