Search Results for "squid-graph"

...By providing formal descriptions of patterns, conventions, and workflows common to Obsidian users, the skills empower AI tools to give more relevant suggestions, generate content that adheres to user conventions, or execute complex multi-step operations that respect the knowledge graph and file relationships.

Hypercube is a tool for visualizing DOT (graphviz), GML, GraphML, GXL and simple text-based graph representations as SVG and EPS images. Hypercube comes with a Qt based GUI application and a Qt-independent command-line tool. It uses a simulated annealing algorithm to lay out the graph, that can be easily parameterized to achieve the desired look. The main development goals are portability and easy usage rather than high performance and complexity.

CRGREP searches for matching text in databases, various document formats, archives and other difficult to access resources. A command line tool for name and content text matching in database tables, plain files, MS Office documents, PDF, archives, MP3 audio, image meta-data, scanned documents, maven dependencies and web resources. CRGREP will search resources within resources of any arbitrary combination or depth, so text within a document within a zip archive, and so on. Here you...

Next generation sequencing has opened new avenues for sequencing prokaryotes which were difficult or either impossible to culture. Now, it is possible to sequence all organisms present in a metagenomic community. However, a critical problem is to determine the host organism for each genomic fragment present in the dataset. This project provides the computational tools for assigning the organismal identity for each genomic scaffold in the given dataset. For more detailed documentation...