Showing 27 open source projects for "novel."

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  • 1

    ExCon Imager

    Gigapixel GPU accelerated radio interferometric imager

    ExCon can create images with a very wide field of view (more than billion pixels). It implements novel gridding and image weighting algorithms. It is well suited to make ultra deep radio interferometric images, minimizing aliasing artefacts and PSF variation. NVIDIA GPU acceleration is available. JAVA/SCALA support available.
    Downloads: 0 This Week
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  • 2
    TurboPFor

    TurboPFor

    Fastest Integer Compression

    Fastest Integer Compression. ALL functions are available for AMD/Intel, 64-bit ARMv8 NEON Linux+MacOS/M1 & Power9 Altivec. 100% C (C++ headers), as simple as memcpy. OS:Linux amd64, arm64, Power9, MacOs (Amd/intel + Apple M1).
    Downloads: 0 This Week
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  • 3

    Microarray assosiated motif analyzer

    Cis-element prediction tool from microarray data

    We developed a novel clustering-free method, microarray-associated motif analyzer (MAMA), to predict novel cis-acting elements based on weighted sequence similarities and gene expression profiles in microarray analyses. Simulation of gene expression was performed using a support vector machine and based on the presence of predicted motifs and motif pairs.
    Downloads: 0 This Week
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  • 4

    Chronological Cohesive Units

    The experimental source code for the paper

    The experimental source code for the paper, "A Novel Recommendation Approach Based on Chronological Cohesive Units in Content Consuming"
    Downloads: 1 This Week
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  • 5

    Advance-PCT-1.0

    A novel Code transformation technique to guide test input generator

    Advance_PCT is a pre-processing technique, that simplifies the complex boolean expression present in a C program. It identifies the boolean expression and creates equivalent conditional branches with an empty body. These additional statements along with original program supplied into test executor to improve test data. It ensures that each atomic conditions have been invoked at least once true and once false. It is done to achieve higher MC/DC, because according to the definition of MC/DC it...
    Downloads: 0 This Week
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  • 6

    Random Bits Forest

    RBF: a Strong Classifier/Regressor for Big Data

    ...It first generates and selects ~10,000 small three-layer threshold random neural networks as basis by gradient boosting scheme. These binary basis are then feed into a modified random forest algorithm to obtain predictions. In conclusion, RBF is a novel framework that performs strongly especially on data with large size.
    Downloads: 1 This Week
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  • 7

    lpACLib

    An Open-Source Library for Low-Power Approximate Computing Modules

    The “lpACLib” library contains the VHDL description of accurate and approximate versions of several arithmetic modules (like adders and multiplier of different bit-widths) and accelerators. Moreover, it also provides the corresponding software behavioral models/implementations developed in C and MATLAB to enable quality characterization. Besides our novel designs, it also contains implementations for several state-of-the-art arithmetic modules and their approximate versions. This open-source library facilitates research and development in approximate computing at higher abstraction levels, and to facilitate reproducible research and comparisons. In case of usage, please refer to our publication: Muhammad Shafique, Rehan Hafiz, Semeen Rehman, Walaa El-Harouni, Jörg Henkel, "Cross-Layer Approximate Computing: From Logic to Architectures", Design Automation Conference (DAC), 2016. ...
    Downloads: 0 This Week
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  • 8

    iCAS - An Illumina Clone Assembly System

    An Illumina clone assembly system using SOAPdenovo and ABySS

    ...However, assemblies obtained using current whole genome assemblers are often fragmented and sometimes have issues of genome completeness owing to different data characteristics introduced by multiplexed sequencing. With iCAS the data filtering process is based on a novel kmer frequency algorithm, resulting in near perfect pre-assembly reads. Contigs are generated using different assembly algorithms and then merged together to achieve longer continuity. Re-aligning all the reads back to the draft contigs and recalibrating each sequence base achieves a final consensus. Using finished clones for QC, the pipeline is able to obtain assemblies with clone coverage of 99.7% and consensus base quality of Q39. ...
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  • 9
    SOAPdenovo2

    SOAPdenovo2

    Large-size genome de-novo assembler

    What's next of SOAPdenovo2: MEGAHIT is the formal successor of SOAPdenovo2 MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph http://www.ncbi.nlm.nih.gov/pubmed/25609793 https://github.com/voutcn/megahit Latest Code on GitHub: https://github.com/aquaskyline/SOAPdenovo2 SOAPdenovo is a novel short-read assembly method that can build a de novo draft assembly for human-sized genomes. The program is specially designed to assemble Illumina short reads. It creates new opportunities for building reference sequences and carrying out accurate analyses of unexplored genomes in a cost effective way. SOAPdenovo2 is the successor of SOAPdenovo. ...
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    Downloads: 5 This Week
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  • 10

    ExonFinder

    A pipeline to extract novel cassette exons/retained-introns

    ExonFinder provides a pipeline to extract novel cassette exons and novel retained-introns from the results of mapping cross-species ESTs against a target genome via blat.
    Downloads: 0 This Week
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  • 11
    Extended Object Tcl (for short: XOTcl) is an object-oriented scripting language based on Tcl. It was originally designed for providing language support for design patterns and provides novel constructs such as filters or transitive mixin classes.
    Downloads: 0 This Week
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  • 12

    GENIE (GEne-geNe IntEraction)

    GPU based Parallel Gene-Gene Interaction Analysis

    ...However, currently there are no genetic analysis software packages that allow users to fully utilize the computing power of these multi-core devices for genetic interaction analysis for binary traits. Here we present a novel software package GENIE, which utilizes the power of multiple GPU or CPU processor cores to parallelize the interaction analysis. Citation: Chikkagoudar, S., Wang, K., & Li, M. (2011). GENIE: a software package for gene-gene interaction analysis in genetic association studies using multiple GPU or CPU cores. BMC research notes, 4(1), 158.
    Downloads: 0 This Week
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  • 13
    de-ess

    de-ess

    De-essing software to reduce sibilance in speech using TSP

    This de-esser uses a novel approach called Temporal Sibilance Processing. The idea is to distinguish between fricatives and voiced sections of the speech signal by the number of zero crossings in time. Most of the speech file is left untouched (the samples are directly copied from source to destination). Only fricatives that are long enough and loud enough are filtered.
    Downloads: 0 This Week
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  • 14

    NovelSeq

    Novel sequence insertion detection

    The NovelSeq pipeline is designed to detect novel sequence insertions using high throughput paired-end whole genome sequencing data.
    Downloads: 1 This Week
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  • 15
    FlexGrePPS forms the foundation of a novel antigenic screening methodology that is based on the representation of an entire proteome by near-optimal degenerate peptide pools.
    Downloads: 0 This Week
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  • 16
    ONSlaught is an ONScripter clone with Unicode support and other features. Its aim is to completely replace ONScripter as an open source visual novel engine by providing a completely new design and new features.
    Downloads: 2 This Week
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  • 17
    An Error Handler for C/C++ funtions, focused on code readability. It allows a clear control flow, adding Ignore, Retry, Jump, and Back functionality when a function returns error. It's macro based, written in C and targeting embedded systems.
    Downloads: 0 This Week
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  • 18
    This is a research project that aims to build a multi-threaded operating system environment for wireless sensor networks, called LiteOS, that implements a few novel features for wireless sensor network software development.
    Downloads: 0 This Week
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  • 19
    Luvalley is a lightweight type-1 Virtual Machine Monitor (VMM) with novel architecture, to enable any OS to host virtual machines as pure applications by utilizing hardware virtualization extensions such as Intel VT and AMD-V.
    Downloads: 0 This Week
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  • 20
    The ANA Project aims at exploring novel ways of organizing and using networks beyond legacy Internet technology.
    Downloads: 0 This Week
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  • 21
    A novel Grid System which is Python based and Cell powered. By extending Namespace into GridSpace, any objects are accesable throughout the Grid. And the codes are distributed executed and be JIT compiled into Cell SPE instructions automatically.
    Downloads: 0 This Week
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  • 22
    Tristero is a framework for creating distributed peer-to-peer file sharing applications. It uses standard technologies for each component, reducing the work of implementing a particular network architecture to the novel aspects of that system and eliminat
    Downloads: 2 This Week
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  • 23
    MouseLoupe - a novel accessibility tool for people with low vision. It's a kind of magnifying glass combined with the mouse pointer which allows an easy and pleasant web navigation. The main goal of the project is social inclusion by digital inclusion.
    Downloads: 1 This Week
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  • 24
    LEAP is an RDBMS (Relational Database Management System) implementing the relational Algebra - a core part of relational database theory. It is primarily used as an educational tool, but has found some novel uses and applications.
    Downloads: 1 This Week
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  • 25
    Ingenix is a novel approach to distributed computing and is an exiting attempt to alter the Operating Systems landscape that hasn't really changed much in over 30 years. It is based on an exokernel architecture and written from scratch.
    Downloads: 5 This Week
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