Search Results for "burrow-wheeler"
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Showing 6 open source projects for "burrow-wheeler"
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BWA is a program for aligning sequencing reads against a large reference genome (e.g. human genome). It has two major components, one for read shorter than 150bp and the other for longer reads.
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olego
OLego – short or long RNA-seq read mapping to discover exon junction
...OLego adopts a seeding and extension scheme, and does not rely on a separate external mapper. It achieves high sensitivity of junction detection by using very small seeds (12-14 nt), efficiently mapped using Burrows-Wheeler transform (BWT) and FM-index. This also makes it particularly sensitive for discovering small exons. It is implemented in C++ with full support of multiple threading, to allow fast processing of large-scale data. -
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xxteac - XXTEA Encrypter/Decrypter
xxteac - XXTEA Encrypter/Decrypter
This xxteac program utilizes the "Corrected Block TEA" encryption/decryption algorithm by Roger Needham and David Wheeler. The original algorithm has been slightly modified to allow arbitary length passwords / password files. -
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Burrow-owl is a software package for visualizing multidimensional nuclear magnetic resonance (NMR) spectra, with an emphasis on spectra used in macromolecular structure determination.
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Taglib Windows port of the "TagLib Audio Meta-Data Library" originally written by Scott Wheeler and others at the KDE project. Original project page: http://developer.kde.org/~wheeler/taglib.html source is in cvs as module "taglib"
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Help implement an industrial strength Burrows-Wheeler transform compressor! Initial release covers block-sort, MTF coding, RLE coding, Huffman coding
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