Search Results for "dna simulation"
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Showing 4 open source projects for "dna simulation"
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oxDNA
A code primarily aimed at DNA and RNA coarse-grained simulations
The oxDNA code has been moved to https://github.com/lorenzo-rovigatti/oxDNA, please go there for new releases. -
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LivMach Framework
A virtual organism simulation framework written in C++
This is a C++ code to simulate life processes and responses to external stimulii in multicellular organisms by replicating the data flow in an actual organism using a straightforward approach. It can simulate both stimulus response and life processes(like respiration,excretion etc.) at the same time using multi-threading techniques. Digital DNA simulation- translation and transcription of DNA template to RNA is now supported. Users can also simulate cells and tissues using inbuilt classes. -
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RAINIER: Rapid Automated Inference of Nucleic-Acid Interaction Energy using Refinement RAINIER is a protein simulator that can predict the interface structure of DNA- and RNA-binding proteins, using statistical and physical techniques.
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