ATTENTION: Cumulative update 2.5.0 has been released!! The update works for any previous 2.x.x version. If upgrading from version v1.x.x, please download and install v2.0.0 first.
IMPORTANT FIXES in respect to base v2.0.0 version:
v.2.5.0 introduces the Differential Attenuation and Cube Viewer utilities, and migrates user database to *.json files
v2.4.3 fixes a with K element in the fit-approx method
v2.4.3 fixes and issue where saving plots with fit-approx or a auto-wizard could...
pycoQC computes metrics and generates Interactive QC plots
PycoQC computes metrics and generates interactive QC plots for Oxford Nanopore technologies sequencing data. PycoQC relies on the sequencing_summary.txt file generated by Albacore and Guppy, but if needed it can also generate a summary file from basecalled fast5 files. The package supports 1D and 1D2 runs generated with Minion, Gridion and Promethion devices and basecalled with Albacore 1.2.1+ or Guppy 2.1.3+. PycoQC is written in pure Python3. Python 2 is not supported.