Search Results for "annotation"
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Showing 33 open source projects for "annotation"
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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Enterprise-grade ITSM, for every businessFreshservice is an intuitive, AI-powered platform that helps IT, operations, and business teams deliver exceptional service without the usual complexity. Automate repetitive tasks, resolve issues faster, and provide seamless support across the organization. From managing incidents and assets to driving smarter decisions, Freshservice makes it easy to stay efficient and scale with confidence.
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Diffgram
Training data (data labeling, annotation, workflow) for all data types
...This is aimed to reduce your data labeling bills and increase your Training Data Quality. Training Data is the art of supervising machines through data. This includes the activities of annotation, which produces structured data; ready to be consumed by a machine learning model. Annotation is required because raw media is considered to be unstructured and not usable without it. That’s why training data is required for many modern machine learning use cases including computer vision, natural language processing and speech recognition. -
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ggforce
Accelerating ggplot2
ggforce is an extension package for ggplot2 that introduces specialized statistical transforms, geoms, and layout utilities to enhance and complement the built-in ggplot2 offerings. It enables more advanced visualization techniques such as faceting enhancements, hulls, annotation marks, and novel layouts for network data and marked regions. -
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Datumaro
Dataset Management Framework, a Python library and a CLI tool to build
...It supports importing and exporting annotations and images across a wide variety of standards like COCO, PASCAL VOC, YOLO, ImageNet, Cityscapes, and many more, enabling easy integration with different training pipelines and tools. Datumaro makes it easy to merge datasets, split them into training/validation/test subsets, filter or transform annotations, and validate annotation quality — all while preserving metadata and supporting detailed statistics. It’s especially useful when you’re dealing with heterogeneous data sources or need to prepare complex datasets for machine learning workflows, freeing you from writing custom scripts for every format conversion. -
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FiftyOne
The open-source tool for building high-quality datasets
...Use it to get hands-on with your data, including visualizing complex labels, evaluating your models, exploring scenarios of interest, identifying failure modes, finding annotation mistakes, and much more! Surveys show that machine learning engineers spend over half of their time wrangling data, but it doesn't have to be that way. -
Gemini 3 and 200+ AI Models on One PlatformBuild generative AI apps with Vertex AI. Switch between models without switching platforms.
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ggpubr
'ggplot2' Based Publication Ready Plots
ggpubr is an R package that provides easy-to-use wrapper functions around ggplot2 to create publication-ready visualizations with minimal code. It streamlines plot creation for researchers and analysts, allowing features such as statistical annotation, theme customization, and plot arrangement with fewer lines of code. -
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SleepFM-Clinical
Improve human sleep through scientifically
SleepFM-Clinical is a specialized version of SleepFM designed for clinical and research environments, offering an adaptive audio modulation system aimed at improving human sleep through scientifically guided soundscapes. Rather than simply playing static white noise or ambient tracks, it uses a closed-loop, frequency-modulated framework that responds to user-specific sleep patterns and physiological signals to tailor sound in ways that can enhance sleep onset and depth. The clinical release... -
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clusterProfiler
A universal enrichment tool for interpreting omics data
clusterProfiler is an R/Bioconductor package that provides a unified workflow for functional enrichment analysis to interpret high-throughput omics results. It supports both over-representation analysis and gene set enrichment analysis, letting you work with unranked gene lists or ranked statistics from differential pipelines. The package connects to multiple knowledge bases—such as Gene Ontology, KEGG, Reactome, Disease Ontology, MeSH and others—through a consistent interface so you can... -
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Superstruct
A simple and composable way to validate data in JavaScript
This project is a lightweight validation library for JavaScript and TypeScript that helps you define data “shapes” and validate runtime values against them. Instead of relying only on compile-time typing, it focuses on the reality that many apps receive unknown input from APIs, forms, and external systems, and those values need runtime checks. Its API is intentionally familiar if you’ve used TypeScript, Flow, Go structs, or GraphQL schemas, but the output is oriented around runtime... -
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beCPG PLM (Product Lifecycle Management)
New Product Development, Projects and Quality management
beCPG is an open source Product Lifecycle Management (PLM) software that manages the entire lifecycle of a product from its conception, through design and manufacture, to service and disposal. beCPG permits you to work on products and projects with customers and suppliers. beCPG is ready to use for the CPG industries such as Food & Beverage and Cosmetics. We differentiate ourselves from the competitors with a comprehensive and user-friendly software offered at a competitive price. In... -
Fully Managed MySQL, PostgreSQL, and SQL ServerCloud SQL handles your database ops end to end, so you can focus on your app.
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Strings Edit
String editing and formatting library for Ada
Strings edit is a library that provides I/O facilities for integers, floating-point numbers, Roman numerals, and strings. Both input and output subroutines support string pointers for consequent stream processing. The output can be aligned in a fixed size field with padding. Numeric input can be checked against expected values range to be either saturated or to raise an exception. For floating-point output either relative or absolute output precision can be specified. UTF-8 encoded strings... -
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pdf combiner merger converter splitter
PDF Combiner is a user-friendly, GUI-based tool built in
PDF Combiner is a user-friendly open source free to use, GUI-based tool for combining, pdf to excel, pdf to word, image to pdf, zip, unzip annotate and splitting PDF files. It is easy to use, supports multiple file insert and delete and process, and allows you to adjust the order of files before combining. -
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DataGym.ai
Open source annotation and labeling tool for image and video assets
...Your image data can be imported into DATAGYM from your local machine, from any public image URL or directly from an AWS cloud S3 bucket. Machine learning teams spend up to 80% of their time on data preparation. DATAGYM provides AI-powered annotation functions to help you accelerate your labeling task. The Pre-Labeling feature enables turbo-labeling – it processes thousands of images in the background within a very short time. -
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scArches
Reference mapping for single-cell genomics
Single-cell architecture surgery (scArches) is a package for reference-based analysis of single-cell data. scArches allows your single-cell query data to be analyzed by integrating it into a reference atlas. By mapping your data into an integrated reference you can transfer cell-type annotation from reference to query, identify disease states by mapping to healthy atlas, and advanced applications such as imputing missing data modalities or spatial locations. -
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MagicalPdfEditor
This is a small PDF editor based on OpenPdf core and AndroidPdfViewer
...All functionality in AndroidPdfViewer (Load, Read, Render, Show, ... PDF Files) Add annotations into pdf file. Add the Image into pdf file as OCG item. Remove annotations from pdf file. Update annotation in pdf file. -
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JPDF Viewer
Your Java Swing PDF Viewer/Reader cross platform
A simple PDF Viewer that allows you to be able to view, print and extract the contents of your pdf file in just a few clicks. You can export the contents of the pdf in svg format or txt. The Viewer is also equipped with a handy utility panel with search functions, thumbnails and annotations. Get Your PDF Reader for Android - https://play.google.com/store/apps/details?id=com.ulm.pdfreader =============================== Get now your Word Processor in pure java:... -
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GAPE
proteogenomic analysis software
GAPE is a one-stop proteogenomic informatics software that provides a multifaceted and standard workflow against eukaryotes in proteogenomic data-analysis cycle for genome refinement and global identification of PTM events. This software allows concurrent querying of proteomic and genomic databases to refining the genome and proteome annotations comprehensively. This includes MS data and database construction, database searches, FDR calculations, statistical result integration, validation of... -
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ParTools
Support for manual parallelization of sequential C programs.
ParTools allows the interactive analysis of a C program execution profile and data dependencies to facilitate the discovery and selection of suitable parallelization candidates in a manual parallelization process. The flow does not assume any specific parallelization technique, thus it can be broadly applied. The original (serial) C source is automatically annotated to trace the execution profile and data dependencies at run-time. The annotated program is then executed using a... -
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Ondex Web
Web-based visualisation of networks using Java
Ondex Web is a new web-based implementation of the network visualization and exploration tools from the Ondex data integration platform. New features such as context-sensitive menus and annotation tools provide users with intuitive ways to explore and manipulate the appearance of heterogeneous biological networks. Ondex Web is open source, written in Java and can be easily embedded into Web sites as an applet. Ondex Web supports loading data from a variety of network formats, such as XGMML, NWB, Pajek and OXL -
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DMETANALYZER
A tool for supporting pharmacogenomics data analysis
We developed DMET-Analyzer a tool for the automatic association analysis among the variation of the patient genomes and the clinical conditions of patients, i.e. the different response to drugs. The proposed system allows: (i) to automatize the workflow of analysis of DMET-SNP data avoiding the use of multiple tools; (ii) the automatic annotation of DMET-SNP data and the search in existing databases of SNPs (e.g. dbSNP), (iii) the association of SNP with pathway through the search in PharmaKGB, a major knowledge base for pharmacogenomic studies. DMET-Analyzer has a simple graphical user interface that allows users (doctors/biologists) to upload and analyse DMET files produced by Affymetrix DMET-Console in an interactive way. -
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Xi Spectrum Viewer
Mass Spectrum Viewer Tool
To overcome current limitations in published MS data accessibility, we introduce a browser-based spectrum viewer that aims to allow exploration of alternative interpretations for MS spectra and additionally: can be operated by non-specialists, is open source, can be integrated into other software, gives appropriate publication-quality output. Spectrum Viewer is implemented totally on the client side using XHTML for menus and dialogs, SVG for spectrum and peptide display, and Javascript to... -
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This toolkit is a visualized toolkit for manual semantic annotation. This toolkit is divided into 3 components, depending on its target user: COAT annotator, COAT conjugator, and COAT administrator. COAT Light is a version operating on file system.
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Whyteboard is a painting whiteboard application for Linux and Windows, that allows the annotation of PDF and PostScript documents, and image files with common drawing tools.
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Sanchay is a collection of tools and APIs for language researchers. It has some implementations of NLP algorithms, some flexible APIs, several user friendly annotation interfaces and Sanchay Query Language for language resources.
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Meta-Messager: A project that aims to develop a Semantic Web based framework for semantic annotation of B2B message schemas (e.g. XML, EDIFACT, ASN.1) and translation of B2B messages to and from business ontologies.
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jPersist is an extremely powerful object-relational database persistence API that manages to avoid the need for configuration and annotation. jPersist uses JDBC and can work with any database supported by JDBC and any type of connection resource.
