Search Results for "graph algorithms"

The goal of this project is to implement a graph layout / network visualization algorithm as a Java plugin for Cytoscape (http://cytoscape.org/), using a recently published relative entropy optimization based method, called Unified Data Representation (Kovács IA et al. Sci Rep. 2015). If you are using the plugin, please cite: Ágg B, Császár A, Szalay-Bekő M, Veres DV, Mizsei R, Ferdinandy P, Csermely P and Kovács IA (2019) The EntOptLayout Cytoscape plug-in for the efficient visualization...

Do you have a haystack (legacy) of Excel files that reference each other and you can't see clear anymore? This tools crawls Excel files and builds up a visual graph. It shows which files might be outdated because they reference a file which was modified more recently. The graph is dynamic, you can choose between different layout algorithms and rearrange by hand. Allows you to quickly open the file, dump the graph, dump all links within a file, highlight all the cells that reference other excel files. ...

MuLaViTo is a multi-layer visualization framework which allows to visualize relations between multiple graphs in derived applications. Moreover, it provides helpful means like k-shortest path algorithms, running algorithms in a separate thread, ...

GrALoG is a tool for editing and visualising graph-like-structures and the results of algorithms running on them. Through it's plugins GrALoG is hugely extendable, i.e. plugin-developers can define their own graph-like structures and algorithms.

OntoViz, an ontology browser is an extension of my undergraduate honors thesis. This helps a user browse ontologies using a variety of graph drawing algorithms. The ontology can be specified using a text file, a local/remote database or a web service.

A Java software for 3D visualization of graphs/networks. It implements many graph layout algorithms (such as force-directed methods), graph generators (such as scale-free networks) and graph modifiers. Most functions can be accessed through its GUI.

Suvi is a Java-library for graph visualization and a framework for developing graph visualization algorithms.

GraphScript project is a network theory simulator based purely on Java and Java scripting engines. It is intended to allow fast development, testing and visualization of network theory (graph) algorithms.

Ged(Pluginable Graph Editor) is modern visual Graph Editor, written on java, with pluginable interface for different algorithms on graph's and different graph's formats.