Search Results for "tsv"
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Showing 11 open source projects for "tsv"
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CSV
Utility library for working with CSV and other delimited files
Welcome to CSV.jl! A pure-Julia package for handling delimited text data, be it comma-delimited (csv), tab-delimited (tsv), or otherwise. A fast, flexible delimited file reader/writer for Julia. -
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Automa.jl
A julia code generator for regular expressions
Automa is a regex-to-Julia compiler. By compiling regex to Julia code in the form of Expr objects, Automa provides facilities to create efficient and robust regex-based lexers, tokenizers and parsers using Julia's metaprogramming capabilities. You can view Automa as a regex engine that can insert arbitrary Julia code into its input-matching process, which will be executed when certain parts of the regex match an input. -
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VisiData
A terminal spreadsheet multitool for discovering and arranging data
VisiData is an interactive multitool for tabular data. It combines the clarity of a spreadsheet, the efficiency of the terminal, and the power of Python, into a lightweight utility that can handle millions of rows with ease. A terminal interface for exploring and arranging tabular data. VisiData supports tsv, CSV, SQLite, JSON, xlsx (Excel), hdf5, and many other formats. Requires Linux, OS/X, or Windows (with WSL). Hundreds of other commands and options are also available; see the documentation... -
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csved
CSV Editor with Text-based User Interface (TUI) written in Pure Go
An editor for plaintext tables, consisting of columns separated by arbitrary characters and rows separated by newlines, i.e. tsv, csv and related formats. Licensed under MIT License Copyright (c) 2019 japanoise Source code: https://github.com/japanoise/csved Visit: http://albanese.atwebpages.com -
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csv2odf
csv2odf can convert csv data to formatted spreadsheets and documents.
csv2odf can create business intelligence reports from csv data sources with output to ods, odt, html, xlsx, or docx documents. It uses a template file that you design to control the layout, fonts, and colors. Just query your database with output to csv (or tsv), then use csv2odf to insert the data into your template to produce a nice looking formatted output. It is a command line tool and you can automate the generation of reports by using scripts and cron. It can be used to create spreadsheets... -
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123VCF
An Intuitive and Efficient Tool for VCF file filtration
123VCF has been developed to make the filtration step of VCF files efficient and more importantly easy to understand. It can be used in the most important step of whole exome/genome sequencing data analysis in the research and also clinical settings. User manual: https://dl.adbioinformatics.net/123VCF/123VCF_Manual.ver2.pdf If you use 123VCF, please cite its paper: Eidi, M., Abdolalizadeh, S., Moeini, S. et al. 123VCF: an intuitive and efficient tool for filtering VCF files. BMC... -
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Java Tablesaw
Java dataframe and visualization library
Tablesaw is a dataframe and visualization library that supports loading, cleaning, transforming, filtering, and summarizing data. If you work with data in Java, it may save you time and effort. Tablesaw also supports descriptive statistics and can be used to prepare data for working with machine learning libraries like Smile, Tribuo, H20.ai, DL4J. Import data from RDBMS, Excel, CSV, TSV, JSON, HTML, or Fixed Width text files, whether they are local or remote (http, S3, etc.) Tablesaw supports... -
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miARma-Seq
a A suite designed to study mRNAs, miRNAs and circRNAs
miARma-Seq, which stands for miRNA-Seq And RNA-Seq Multiprocess Analysis, is a suite designed to study mRNAs, miRNAs and circRNAs. It is able to perform differential expression analysis, miRNA-mRNA target prediction and functional analysis among others. Most importantly, it can be applied to any sequenced organism, and it can be initiated at any step of the workflow. As a stand-alone tool, is both easy to install and extremely flexible in terms of its use. It brings together... -
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Hetionet
Hetionet: an integrative network of disease
Hetionet is a hetnet — network with multiple node and edge (relationship) types — which encodes biology. The hetnet was designed for Project Rephetio, which aims to systematically identify why drugs work and predict new therapies for drugs. The JSON and Neo4j formats contain node and edge properties, which are absent in the TSV and matrix formats, including licensing information. Therefore the recommended formats are JSON and Neo4j. Our hetio package in Python reads the JSON format... -
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TimeFinder automatically optimizes schedules (timetables) for universities and high schools. It makes manual timetabling for the timetabler easier via a Java GUI. Export+import is supported via xml and text formats. http://timefinder.sourceforge.net/
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