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Showing 3 open source projects for "python cli"

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    miRge3

    Comprehensive analysis of small RNA sequencing data

    ...This build includes command line interface (CLI) and cross-platform Graphical User Interface (GUI). For more details refer to documentation link below.
    Downloads: 33 This Week
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  • 2
    Hydrogen Bond Analysis Tool (HBAT)

    Hydrogen Bond Analysis Tool (HBAT)

    HBAT v2 is migrated from PERL to Python.

    HBAT(Hydrogen Bond Analysis Tool) is a tool to automate the analysis of hydrogen bonds present in a PDB Structure file. HBAT v2 is migrated from PERL to Python. Latest Documentation: https://hbat.abhishek-tiwari.com/ Latest Github Release: http://github.com/abhishektiwari/hbat Citation: Tiwari, A., & Panigrahi, S. K. (2007). HBAT: A Complete Package for Analysing Strong and Weak Hydrogen Bonds in Macromolecular Crystal Structures. In Silico Biology, 7(6)....
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    Downloads: 0 This Week
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  • 3
    CBMPy

    CBMPy

    PySCeS Constraint Based Modelling

    PySCeS CBMPy is a new platform for constraint based modelling and analysis. It has been designed using principles developed in the PySCeS simulation software project: usability, flexibility and accessibility. CBMPy supports the latest standards for encoding CBM models encoding, SBML L3 FBC, COBRA as well as MIRIAM compliant RDF and custom annotations. Its architecture is both extensible and flexible using data structures that are intuitive to the biologist while transparently...
    Downloads: 0 This Week
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