Showing 11 open source projects for "node-red"

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  • 1

    DEEP

    Differential Evolution Entirely Parallel Method

    The Differential Evolution, introduced in 1995 by Storn and Price, considers the population, that is divided into branches, one per computational node. The Differential Evolution Entirely Parallel method takes into account the individual age, that is defined as the number of iterations the individual survived without changes. The introduced improvements are: (I) allow several oldest individuals to be overwritten by the same number of best ones in the population, (II) new selection rule uses several objective functions in offspring evaluation. ...
    Downloads: 0 This Week
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  • 2
    Cell Paint

    Cell Paint

    cellPAINT allows users to create living illustrations of biology.

    ...There are currently several prototypes available: --cellPAINT_coronavirus includes a newly-redesigned user interface, and molecular building blocks for coronavirus, blood plasma, and a simple human cell --cellPAINT_exo includes hand-painted sprites created by Julia Jimenez during an internship, and also allows input of custom sprites through Mesoscope --cellPAINT_VR is a 3D virtual reality version of cellPAINT, with molecular building blocks for a red blood cell cytoskeleton --cellPAINT_2D is the initial alpha release of cellPAINT, with building blocks for HIV, blood plasma, and a human T-cell. For more information and tutorials, see our website at https://ccsb.scripps.edu/cellpaint Please submit any bug or feature requests to our ticket page.
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    Downloads: 28 This Week
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  • 3
    ANDTool

    ANDTool

    Analysis Nuclei DAB (AND) Tool

    ...The tool requires as input the original RGB images, and the FastRed, FastBlue, DAB channel, easily obtained using the Fiji function: "ImageJ" -> "Image" -> "Colour Deconvolution" -> "FastRed FastBlue DAB" Then, the tool first segment the nuclei using the FastBlue channel and the DAB channel, and then computes statistics by subdividing the sample in three regions according to the FastRed channel: a dark-red ROI, a light-pink ROI and a white ROI. ANDTool is written in MATLAB (The MathWorks, Inc., Massachusetts, USA) and the source code and standalone versions are here available for download. USER MANUAL: see the specific PDF available in the Files section. REQUIREMENTS: MATLAB R2017b and Image Processing Toolbox 10.1 or later versions. ...
    Downloads: 0 This Week
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  • 4

    GPU3SNP

    Exhaustive search for third order epistatic interactions using CUDA

    ...It provides a list with the combinations that have higher Mutual Information, which is used as measure for interaction. It is parallelized using CUDA and can exploit several GPUs in the same node/system.
    Downloads: 0 This Week
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  • 5
    MORPHE

    MORPHE

    MORphological PHenotype Extraction

    MORphological PHenotype Extraction (MORPHE) is a suite of automated image processing, visualization, and classification algorithms to facilitate the analysis of heritable and clonal red-to-green transitions that occurred during the growth of a colony.
    Downloads: 1 This Week
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  • 6
    Arcadia is a light-weight, cross-platform, C++ desktop application designed for visualizing biological networks such as metabolic pathways.
    Downloads: 0 This Week
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  • 7

    RaTrav

    mean first passage times and node occupancies calculations

    RaTrav tool was designed to support computational biology studies where mean first-passage times (MFPTs) between initial and single or multiple final states in network-like systems are used. The tool approves arbitrary networks (graphs) where a dynamics of the Markovian type takes place. Two methods are made available for which their efficiency is strongly dependent on the topology of the defined network: the combinatorial Hill technique and the Monte Carlo simulation...
    Downloads: 0 This Week
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  • 8
    This plugin allow to visualize several e.g. gene expression values simultanously using pie charts. * Please cite http://www.biomedcentral.com/1752-0509/4/164 *
    Downloads: 2 This Week
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  • 9
    Perl Node Interface
    Perl Node Interface (PNI) is a node based visual programming environment. PNI makes easy to humans to write Perl programs. No Perl skill is required, programs are builded graphically. Perl coders can easily extend it writing new nodes.
    Downloads: 0 This Week
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  • 10
    Catalogue of Life Converter

    Catalogue of Life Converter

    MS Access database converts the Catalogue of Life into a gedcom format

    The primary driver of speciation may result from hybridization instead of the accumulation of mutations. The accumulation of mutations may instead be responsible for a "maturation" which may have real physical meaning rather than being an amorphous concept. Scientists such as Donald Williamson and Lynn Margulis have suggested similar ideas but perhaps not going as far as this project assumes. This software converted the Catalogue of Life, catalogueoflife.org, into a gedcom format. It...
    Downloads: 0 This Week
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  • 11
    A Python interface to the Wordnet database of word meanings and lexical relationships. allows the user to type expressions such as N['dog'], hyponyms(N['dog'][0]), and closure(ADJ['red'], SYNONYM) to query the database for lexical relationships.
    Downloads: 1 This Week
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