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    ParDRe

    Parallel tool to remove duplicate DNA reads

    ...UPDATE: From version 2.0.5 ParDRe also provides support to remove only optical duplicates (and leave biologically interesting duplicates) as well as to work with compressed input/output with .gz format.
    Downloads: 0 This Week
    Last Update:
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  • 2

    GapFiller

    A de novo local assembler for paired reads

    GapFiller is a seed-and-extend local assembler to fill the gap within paired reads. It can be used for both DNA and RNA and it has been tested on Illumina data. GapFiller can be used whenever a sequence is to be assembled starting from reads lying on its ends, provided a loose estimate of sequence length.
    Downloads: 0 This Week
    Last Update:
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