Search Results for "java open source" - Page 76
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Showing 2101 open source projects for "java open source"
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The set of tools for biopolymer sequence analysis together with GUI to work with biopolymer sequence databases. The tools include pairwise and multiple alignment, philogenetic tree construction and other.
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A C++ development library designed to make common operations on DNA and protein sequences easy. libGenome provides functionality to read, write, and manipulate sequence and annotation data in several file formats.
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X_batch is a plugin for SPM2, which allows the user to create, store, exchange and execute custom batch scripts and record information into a Protege-based ontology.
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open SPEAR stands for open Simulator of Physical Environment for Agents Research. It is a C++ library designed to build efficient simulation of multi-agents and robotics simulation. The main audience for this project is the robotician/artificial life com
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Atera all-in-one platform IT management software with AI agentsAtera’s AI agents don’t just assist, they act. From detection to resolution, they handle incidents and requests instantly, taking your IT management from automated to autonomous.
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Phight - a phylogeny tree building program Currently, it supports Likelihood method and distance method. This program will includes diagnostic function as a special feature.
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GATA is a graphic alignment tool for comparative sequence analysis. It makes use of BLAST to graphically align two DNA sequences, creating box- line- box representations of window scored local alignments. GATA also displays extensive GFF gene annotation.
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tacg - a fast cmd line app in ANSI C for pattern matching and analysis of nucleic acids and protein.
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The Portable Cray Bioinformatics Library is a C implementation of the proprietary Cray Bioinformatics Library. It is designed to run on a wide variety of platforms in either 32- or 64-bit mode on either big or little endian architectures.
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It moves by itself inside networks like virus infection & plagues, it is being written to solve computer virus problem drastically and responsibly. It is legal, free and open for public domain to improve W3 ICT Security.
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Automated RMM Tools | RMM SoftwareOut-of-the-box scripts. Around-the-clock monitoring. Unmatched automation capabilities. Start doing more with less and exceed service delivery expectations.
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What is it:<br> ----------<br> A simulation of a very simplified aunts nest. <br> It is a restricted area (square) fullfill with aunts and rice.<br> Rice is first randomly positionned in the area and aunts will sort it in a unique batch. <br>
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The Synaptic Simulator is a program which simulates models of single neuronal synapses and compartments, complex constructs of such models. Furthermore the program is able to regain parameters by fitting simulated results with experimental data.
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cy.prus is a cross platform simulation environment for medical cybernetics and systems biology. Its purpose is to provide both a facility for simulating life and a GUI for easily constructing biological information processing structures based on XML.
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A Java software for 3D visualization of graphs/networks. It implements many graph layout algorithms (such as force-directed methods), graph generators (such as scale-free networks) and graph modifiers. Most functions can be accessed through its GUI.
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Sight provides a friendly interface to create and connect agents for bioinformatics. The workflow supports multiple responses to a single request, structure transforms, filters and request history access.Can talk with ordinary http servers (get and post)
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This is a generalized rack widget written using the Gnome Canvas, which is specifically targeted for scientific operations (including Chemistry/Biology). The main purpose of the widget would to visualize standardized containers such as microtiter plates.
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BioEra is DSP visual designer that can be used to create interfaces between human being and a machine with using bio signals like EEG, QEEG, HEG, EMG, ECG, GSR, EOG, visual/sound entrainment and others.
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HomGL is a web-based tool for comparing gene lists obtained e.g. by microarray studies. Unigene, Locus Link & Homology databases are used to compare gene lists with different accession numbers and between different organisms.
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Set of Java packages to apply Genetic Algorithms to any kind of problem. Various genetic operators are implemented and an example shows of how the system could be applied to digital circuit evolution.
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PACLIMS (Phenotype Assay and Characterization Laboratory Information Management System) is a web-based, open source software system for tracking and data capture from high throughput mutational screens. Click on the Home Page Link above for test DB
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Yawn: Yet Another W* Network: a java framework for developing, training and testing neural networks independently of the model and test environment.
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Cluster Networks are a new style of neural simulation / neural network modeling, that models networks of neural populations ("clusters") that transform and transmit information using precisely-timed, graded bursts ("pulses" or "volleys") of firing.
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Java/XML toolkit for research using Bayesian networks and other graphical models of probability (exact and approximate inference, structure learning, etc.)
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(OBSOLETE) trace_utils is a program for processing sequencing trace data. The main goal of this program is to provide a completely free software in detecting SNPs like what polyphred has done, but with even higher accuracy and more flexibility.
