Showing 127 open source projects for "engineering"

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  • 1
    BioAGENDA
    AGENDA (Application for mining Gene Ontology Data)
    Downloads: 0 This Week
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  • 2
    Index biological data (genbank sheets, Uniprot...) in a Solr indexer, with index shard support and provides a query interface. Project goal is to create a virtual image with indexer and web interface to query and visualize biological data.
    Downloads: 0 This Week
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  • 3
    riboPicker
    A bioinformatics tool to identify and remove rRNA sequences from metagenomic and metatranscriptomic datasets. The rRNA-like sequences are classified by domain, subunit. and bacterial phyla. Coverage plots for the top hits are provided as well.
    Downloads: 0 This Week
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  • 4
    The project would include the development of XUL, CSS and Javascript components to assist biologists in sequence manipulations, data mining, data analysis, etc.).
    Downloads: 0 This Week
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  • 5
    The Generic Genetic Studies Database (GGSD) is a web-based, relational database driven data management software package for the management of large scale genetic studies.
    Downloads: 0 This Week
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  • 6
    GPL-licensed Electronic Medical Record and Practice Management system for medical providers that runs in any web browser in multiple languages. It provides an XML-RPC backend and multiple import and export formats, as well as reporting and other features
    Downloads: 1 This Week
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  • 7
    ASSD is a simple biological sample database focused on the storage of proteomics data. It tracks every processing step incl. results throughout a sample's lifetime. Next to proteomics data it can also store other results like FACS or Western Blots.
    Downloads: 0 This Week
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  • 8
    BoulderALE is an RNA alignment editor, which allows for the annotation of basepairs, annotation and collapsing of features (horizontal) and sequences (vertical), along with 2D display of sequences and base composition given a secondary structure.
    Downloads: 0 This Week
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  • 9
    This project intends to create a bacteria simulator framework, with some realistic bacteria control methods based on chemical signaling, simple sensors, motors and neural networks. The bacteria will evolve in a genetic algorithm environment.
    Downloads: 0 This Week
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  • 10
    GPDE
    The GPDE is a biological protein database based on the PRIDE xml format. It combines proteomics experiments based on the investigated cell type and creates a biological meta-analysis. Try it out at http://www.meduniwien.ac.at/proteomics/database.
    Downloads: 0 This Week
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  • 11
    Protein Data Bank transformed into an SQL database with a very powerful search engine and a rich web interface. The engine combines chemical, sequence and 3D structure searches. The interface provides statistics, sequence and 3D structure alignments.
    Downloads: 0 This Week
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  • 12
    CellPublisher is a free, open source program to improve the navigation of biological pathways. It converts CellDesigner diagrams into fully-featured maps that live inside a browser. The navigation is based on the Google maps API.
    Downloads: 0 This Week
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  • 13
    THIS PROJECT HAS MOVED TO GITHUB
    Downloads: 0 This Week
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  • 14
    IBIS - Interactive Biodiversity Informatics Software - is software to identify species or other taxa. Intended users range from school children or citizen scientists to ecologists or taxonomists. The identification keys can be embedded in CMS or Wiki
    Downloads: 0 This Week
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  • 15
    Cscape is an application for visualizing and navigating through data from a Reverse Phase Protein Microarray (RPMA). Cscape uses the Google Maps API to map the RPMA data on top of an image of a cancer cell and its associated pathways.
    Downloads: 0 This Week
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  • 16
    BioPerl implemented in JavaScript. The library aims to promote and aid the development of bioinformatics applications in JavaScript much the same way as BioPerl helps bioinformatics development in Perl.
    Downloads: 0 This Week
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  • 17
    Care4G is a web-based software, as forking of the most famous care2x, it will be a complete HIS for the II Millennium...
    Downloads: 0 This Week
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  • 18
    This project develops a web-based (JSP) Fuzzy Rule-Based Expert System for analyzing ECG (electro cardio gram) signals & diagnosing Tachi-Arrhythmias. Proj. main blocks: inference engine, knowledgebase, KB editor, explanation, and feature extraction.
    Downloads: 0 This Week
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  • 19
    PhenoFam is a web-based application that performs gene set enrichment analysis (GSEA) by employing structural and functional information on families of protein domains as annotation terms.
    Downloads: 0 This Week
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  • 20
    This software is a GIS, they permit contextualize the information and the extrapolation of knowledge. Permit to calculate the distribution of blood donors and cross reference this with the places of collect.
    Downloads: 0 This Week
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  • 21
    A repository linking to eight Bioinformatics Resource Centers (BRCs) sponsored by the NIAID. The BRCs are providing web-based resources to scientific community conducting basic and applied research on organisms considered potential agents of bioterrorism
    Downloads: 0 This Week
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  • 22
    BioNotate is an open-source web-based tool for the collaborative and distributed annotation of biomedical text with entities and facts of interest.
    Downloads: 0 This Week
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  • 23
    This Project moved to https://sourceforge.net/projects/synbiowave/ because the name GeneWave is a registered trademark... Please do not use this project anymore.
    Downloads: 0 This Week
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  • 24
    Systems biology Php library, is an easy to use, a set of libraries used in different web site solutions which include (but not limited to) SBML, SBGN, MathML, SVG and Silverlight in Windows, XHTML, Ajax, ORM's. Suitable for any portal, systems biology
    Downloads: 0 This Week
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  • 25
    ICRPfinder finds or generates DNA patterns which can include restriction enzyme recognition sites in coding sequences without changing the translated protein sequence.
    Downloads: 0 This Week
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