Showing 29 open source projects for "mac"

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  • 1
    UnityMol

    UnityMol

    Molecular viewer and prototyping framework

    !!! New website is https://unity.mol3d.tech and new releases/source code are now on Github : https://github.com/LBT-CNRS/UnityMol-Releases !!!! Implementation of a visualization prototype for molecular structures and networks using the Unity3D game engine. Implementation of numerous graphical methods as spheres, particle systems, bond, etc.. as well as our recent HyperBalls methodology (see: www.hyperballs.sf.net).
    Downloads: 5 This Week
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  • 2
    SBW (Systems Biology Workbench)

    SBW (Systems Biology Workbench)

    Framework for Systems Biology

    The Systems Biology Workbench(SBW) is a framework for application intercommunications. It uses a broker-based, distributed, message-passing architecture, supports many languages including Java, C++, Perl & Python, and runs under Linux,OSX & Win32. It comes with a large number of modules, encompassing the whole modeling cycle: creating computational models, simulating and analyzing them, visualizing the information, in order to improve the models. All using community standards, such as...
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    Downloads: 2 This Week
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  • 3
    LibSEDML: Sharing Simulation Experiments
    This project hosts a library and tools for sharing simulation experiments encoded using SED-ML.
    Downloads: 0 This Week
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  • 4
    DigiOz .NET Portal

    DigiOz .NET Portal

    ASP.NET MVC Based Portal CMS System to Create an Instant Website

    DigiOz .NET Portal is a FREE web based portal CMS system written in ASP.NET MVC 5 in C# which uses a Microsoft SQL Database to allows webmasters to setup and customize an instant website for either business or personal use. List of Technologies used: - ASP.NET MVC 5 - Microsoft SQL Server - Bootstrap - HTML 5 - jQuery Demo Site: http://digioznetportal.digioz.net/ Source Code: https://sourceforge.net/p/digioznetportal/codenew/ci/master/tree/ Installation Instructions:...
    Downloads: 0 This Week
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  • 5
    ProteoWizard
    ProteoWizard development moved to GitHub in 2018. The ProteoWizard Library is a set of software libraries and tools for rapid development of proteomics data analysis software. The libraries are cross-platform and built from the ground up using modern C++ techniques.
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    Downloads: 5 This Week
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  • 6
    HCS Analyzer

    HCS Analyzer

    High Content Screening Analyzer

    HCS Analyzer is an open source software dedicated to High Content Screening data processing and analysis.
    Downloads: 2 This Week
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  • 7
    This site hosts the source code for C++ version of the Broker for SBW, NOM module, advanced simulation suite, analysis applications and model editors.
    Downloads: 2 This Week
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  • 8
    RoadRunner represents a state-of-the-art simulation library for SBML models. It is fast, portable and accurate. This projects hosts the library and tools using the library.
    Downloads: 0 This Week
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  • 9
    The Systems Biology Results Markup Language is a language describing data. Unlike flat data formats, SBRML allows describing the origin of the data as well. This project hosts a library and tools for using SBRML.
    Downloads: 0 This Week
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  • 10
    Interactive SBML Simulation Tool
    This project hosts the 'Simulation Tool', an extensible, interactive environment for carrying out simulation experiments of SBML models. This project can use RoadRunner or SBW enabled simulators to carry out simulations.
    Downloads: 0 This Week
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  • 11
    Shoal

    Shoal

    A lot of fish in a shoal, in a gigantic scientific ocean.

    Ours organization website GCModeller.org is coming online soon! Shoal Shell is the sub project for the "genome-in-code"(http://code.google.com/p/genome-in-code/) virtual cell modelling project of the bacteria Xcc 8004. Shoal Shell aim at provide the modelling tool and the debugging tool for the GCModeller virtual cell modelling, And from the extendible library package, shoal shell can manage to accomplish the entire modelling job for any other bacteria species. Shoal Shell Project...
    Downloads: 0 This Week
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  • 12
    ILNumerics.Net
    math lib for .NET. n-dim arrays, complex numbers, linear algebra, FFT, sorting, cells- and logical arrays as well as 3D plotting classes help developing algorithms on every platform supporting .NET. Sources from SVN, binaries: http://ilnumerics.net
    Downloads: 0 This Week
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  • 13
    Project now hosted at GitHub: https://github.com/djparente/coevol-utils
    Downloads: 0 This Week
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  • 14

    GUDM

    A tool for pre-processing and fusing heterogeneous datasets

    Global Unified Data Modeler (GUDM) is a bioinformatics software tool used for pre-processing and integrating multiple heterogeneous datasets, collected from multi-modal sources, into an integrated dataset. This integrated dataset is supposed to be used for different types of medical analysis and unified decisions, using different machine learning approaches.
    Downloads: 0 This Week
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  • 15

    Genomic Binding Sites Analyser (BiSA)

    Genomic Region Archiving and Binding Sites Analysis (BiSA)

    BiSA is a bioinformatics database resource that allows investigators to run a number of overlapping genomic region analyses using their own datasets, or against the pre-loaded Knowledge Base. Analysis results can be restricted to a chromosome; the minimum base pair overlap in two sets or maximum distance between regions can be set; as can the maximum allowed distance between region centres. BiSA is capable of reporting overlapping regions that share common base pairs; regions that are...
    Downloads: 0 This Week
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  • 16
    compare-results

    compare-results

    Program comparing Simulation Results for the SBML TestSuite

    Compare SBML Test Suite Results =============================== The [SBML Testsuite](http://sbml.org/Facilities/Online_SBML_Test_Suite) allows developers of ODE based simulators to test their implementation against a large number of test cases that test a wide aspect of the [SBML Specifications](http://sbml.org/Documents/Specifications). While implementing my simulator [RoadRunner](http://roadrunner.sf.net) I wanted to be able to compare it using a wider range of parameters: -...
    Downloads: 0 This Week
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  • 17
    AUDocker
    AUDocker is a GUI for AutoDock Vina.. helps in virtual screening of huge number of ligands continuously. Helps in resumption of work in accidental shutdowns..
    Downloads: 6 This Week
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  • 18
    An assessmemt tool of sequence repeats for short read sequencing.
    Downloads: 1 This Week
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  • 19
    Tool that compresses and decompresses fastq files.
    Downloads: 0 This Week
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  • 20
    A Collection of STAR/CIF processing libraries and related tools, including sub-projects: AStar, TEStar and others...
    Downloads: 0 This Week
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  • 21
    This cleans unwanted textual information from DNA sequencing results
    Downloads: 0 This Week
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  • 22
    This is a mathematical/informatical/biologocal aproach to System-research. The aim is to write a progrramm that simulates a world with as many mathematical methods as possible at once.
    Downloads: 0 This Week
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  • 23
    The Canopy project is an initiative to merge and expand the functionality of Perl-speaks-NONMEM (PsN), Census, Xpose and PopED. The goal is to produce a coherent, inclusive and convenient platform for pharmacometric data analysis.
    Downloads: 0 This Week
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  • 24
    NeuroBox is an .NET OOP Library to generate, propagate and train complex neuronal networks with technologies like backpropagation with weight decay, momentum term, manhattan training, flatspot elimination etc.
    Downloads: 0 This Week
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  • 25
    JAligner is an open source Java implementation of the dynamic programming algorithm Smith-Waterman with Gotoh's improvement for biological local pairwise sequence alignment with the affine gap penalty model.
    Downloads: 1 This Week
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