Showing 3 open source projects for "memory management"

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    VCF Explorer

    VCF Explorer

    A desktop application for analyzing whole genome VCF files

    ...Most of the existing tools which are developed to analyze exome files are not adequate for large VCF files produced by whole genome studies. In this work we present VCF-Explorer, a variant analysis software capable of handling large files. Efficient memory management of the program and the elimination of preliminary parsing step enable to carry out the analysis at ordinary computers. VCF-Explorer presents an easy to use environment where various types of queries for the annotation and the samples can be defined. VCF-Explorer can be run at different environments and computational platforms ranging from a standard laptop to an advanced server.
    Downloads: 4 This Week
    Last Update:
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  • 2
    Coulson Plot Generator

    Coulson Plot Generator

    Graphics generator for pie diagram matrix from spreadsheets

    For comparative plus/minus spreadsheet data, Coulson Plot Generator application creates a multiple pie diagram, for a rapid visual comparison of subunit occupancy across a range of entities. Numbers of pies, segments, labels and colours are customisable. Creates an editable PDF from a comma separated text file. Now with zoom capability and more memory, for larger datasets. Save images in several formats including SVG.
    Downloads: 2 This Week
    Last Update:
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  • 3
    CAlib3D is a platform independent library for 3D cellular automata (CA) simulations. It is written in C++. Its advantage is in his speed and memory management.
    Downloads: 0 This Week
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