Search Results for "open xml" - Page 4
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Showing 100 open source projects for "open xml"
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BRISC (BRISC Really IS Cool) is 1) a library for Haralick, Gabor and Markov image feature extraction from pulmonary nodule DICOM images and 2) a simple content-based image retrieval (CBIR) system for pulmonary nodule databases (ie. LIDC).
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TRANSFOG DAS (Translational and Functional Onco-Genomics Distributed Annotation System) is an XML-based annotation system to allow the discovery and analysis of candidate genes potentially involved in cancer onset and progression.
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Avian Freeware Suite (AFS) provides two things: Developers with libraries for Java Swing Widgets, XML handling, Fortran95 and Pascal; End users (Medical students, doctors, scientists) with productivity tools they can use (quizzes, XML databasing & PDF)
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BioMa is a specimen based Biodiversity database Manager. It is designed to store, organize, and manipulate biodiversity-related scientific data, either for the purposes of museums, scientific collections, or research projects.
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The BioSchemas project develops XML schemas for the exchange of biological data e.g. through SOAP-based web services. It is a collaborative and open project intended to increase the interoperability between bioinformatics applications.
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Utility to convert the binary file format from an ABI PRISM TM 377 DNA Sequencer to an xml file. New project page: https://github.com/eriksjolund/abi2xml abi2xml was migrated to Github 6 February 2020.
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SENTENSA Knowledge Miner is a platform independent tool for searching any text. SENTENSA uses robust methods of indexing and searching text, leveraging on experience from more than 20 years of information retrieval.
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In silico experiments. Express Taverna's workflows using XQuery. Integrates with Taverna, provides automated XQuery generation from SCUFL. A standard Taverna processor that runs XQuery. Easy XML transformations inside Taverna workflows.
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The JChemPaint Applet and Swing Application are Java programs for drawing 2D chemical structures like those found in most chemistry textbooks. It is based on the Chemistry Development Kit (cdk.sf.net). Downloads, tracker, and source code repository can be found on http://jchempaint.github.com
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Cellontro models and simulates cells, other biological entities, and biochemical networks. Specify your models using XML and Java, or SBML. Cellontro is now completely contained within the Xholon sourceforge project.
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A dialect of XUL implementing most of Mozilla XUL's Fourth Draft. XML User Interface Language (XUL) is a method for easily creating GUI applications. Lux XUL supports Python scripting via Jython 2.1.
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The ORIEL workbench is a data browsing interface for REST-based information retrieval services. Originally developed for Bioinformatics applications.
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runsbml - Pathway Simulation Tool emulates the dynamics of biological pathways by calculating concentrations of biochemical compounds at different times and conditions.
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cy.prus is a cross platform simulation environment for medical cybernetics and systems biology. Its purpose is to provide both a facility for simulating life and a GUI for easily constructing biological information processing structures based on XML.
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Java/XML toolkit for research using Bayesian networks and other graphical models of probability (exact and approximate inference, structure learning, etc.)
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Jaybird is java-language based, source & xml & codebyte class inter-converting tool. You can write your Envolvable Code with it; You can make your computer write program itself; You can run program without compiling time; You can manage source as data
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BioSap-Blast Integrated Oligonucleotide Selection Accelerator Package. BioSap selects unique oligos for microarrays by detecting user-defined parameters and running parallel instances of Featurama and Blast on compute engines, producing xml output files.
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Cooperative effort to develop a Java-XML API and architecture to manage and share health concepts and processes eficiently. Includes a framework to develop healthcare applications (from PDA reminders to hospital information systems) quickly and easily.
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TumorML
TumorML is an XML-based language for cancer models and respositories.
We've moved to GitHub: https://github.com/djbytes/tumorml -
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A main aim of this project is to deliver an infrastructure for HL-7 v3 compilant messages exchange. This infrastructure should be based on existing real time queueing system such as Apache ActiveMQ. A product of this project does not include user interfa
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A framework for image analysis and data analysis, aimed towards microscopy and the needs of current research.
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This project seeks to integrate knowledge, methods and data from various disciplines through the design and implementation of a system that allows for communications between languages and different platforms.
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The SchemaWalker is a Java application able to read a any schema and produce XForms web pages for user selected nodes grouped into webpages to allow editing of XML data files.
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It is a Cross Language Interface Platform that allows different languages to call and execute functions of other languages using xml-rpc as the remote procedure call vehicle.