Showing 487 open source projects for "python::module"

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  • 1
    At the outset, the goal of this program is to provide a suite of tools to aid in the back-translation of amino acid sequences in a manner that provides useful information for synthetic gene design.
    Downloads: 0 This Week
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  • 2
    SINAM -- Simulation Interface for Network Analysis of Metabolism
    Downloads: 0 This Week
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  • 3
    Metaneva
    This workbench tries to manage and analyze neuroscientific animal data with an emphasis on behaviorally orientated experiments. It's goal is to use the behavioral experimental data (stimulus, task, species...) as its source and perform analysis to e
    Downloads: 0 This Week
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  • 4
    A collection of python classes for computational ecology and evolutionary biology.
    Downloads: 0 This Week
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  • 5
    A univariate and multivariate analysis UI. This project is no longer under development. Please use as you wish.
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    Downloads: 39 This Week
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  • 6
    PTools
    PTools : a C++/Python library for macromolecular docking
    Downloads: 0 This Week
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  • 7
    The C Protein Folding Library is a minimalistic, high-performance modular library of C functions and data structures for computing folding simulations of proteins on a wide variety of computer hardware.
    Downloads: 0 This Week
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  • 8
    DANGLE: A Bayesian inferential prediction method for protein backbone dihedral angles and secondary structure assignments, solely from sequence information, experimental chemical shifts and a database of known protein structures and their shifts.
    Downloads: 1 This Week
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  • 9
    An Emacs module to simplify creating and editing NONMEM files.
    Downloads: 2 This Week
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  • 10
    Inter University Multi-Modal Imaging
    Downloads: 0 This Week
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  • 11
    BARNACLE
    BARNACLE is a Python library for RNA 3D structure prediction. It can be used for probabilistic sampling of RNA structures that are compatible with a given nucleotide sequence and that are RNA like on a local length scale.
    Downloads: 1 This Week
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  • 12
    RADAR stands for Rapid Automatic Detection and Alignment of Repeats in protein sequences. RADAR identifies gapped approximate repeats and complex repeat architectures involving many different types of repeats. Radar has moved to github (https://github.com/AndreasHeger/radar)
    Downloads: 0 This Week
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  • 13
    EUtils is a python client-side library for querying the NCBI's Entrez life science databases through the NCBI eUtils web services.
    Downloads: 0 This Week
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  • 14
    A colorized interactive dotplot program designed for pair-wise comparisons of RNA & DNA. The original idea was from the mind of late Prof. William J. Dreyer of Caltech. The idea is to be able to see the "tapestry" of life, which comes alive with color.
    Downloads: 0 This Week
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  • 15
    FociCounter is a simple and user-friendly program for analysis of gamma-H2AX foci. It allows to determine the number of foci in a single cell, a foci intensity as well as a cell intensity.
    Downloads: 0 This Week
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  • 16
    A web-based system for upoading, managing, sharing, and analyzing bioinformatic data. The system is primarily written in python, and runs on both linux and MacOs.
    Downloads: 0 This Week
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  • 17
    Tandem mass spectral peptide identification and validation software, similar to X!Tandem, OMSSA, MyriMatch. Suitable for single hosts through large clusters. Written in Python for simplicity, with performance-critical sections in C++.
    Downloads: 0 This Week
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  • 18
    A collection of tools for use in gene naming, including standardization, selection, and comparison.
    Downloads: 0 This Week
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  • 19
    This project implements an algorithm for segmenting protein sequences into smaller meaningful blocks. The method is based on the pure statistical approach and it uses an analogy between proteins and natural language.
    Downloads: 0 This Week
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  • 20
    This project contains a Drupal module that enables parents to keep track of the growth of their children.
    Downloads: 0 This Week
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  • 21
    This project is started out of the idea to simulate simple creatures like game of live. The goal is to build up an multi processor/host environment to simulate the building of simple live in given world environments.
    Downloads: 0 This Week
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  • 22
    The VRML97-Import-Script is a Python-Script, that extends the capabilities of Blender to import VRML97-Files. It supports Blender since version 2.42.
    Downloads: 0 This Week
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  • 23
    Tools to perform metabolic control analyses on biochemical network models in SBML format. Allows computation of first and second order response coefficients, elasticities, first order control coefficients and first order spectral response coefficients.
    Downloads: 0 This Week
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  • 24
    A GUI-based search tool that allows the exploration of the relationships between Metabolites.
    Downloads: 0 This Week
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  • 25
    Brian is a new simulator for spiking neural networks available on almost all platforms. The motivation for this project is that a simulator should not only save the time of processors, but also the time of scientists.
    Downloads: 0 This Week
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