Search Results for "multiple sequence alignment"
Sort By:
Showing 42 open source projects for "multiple sequence alignment"
View related business solutions-
Ship Agents FasterGemini Enterprise Agent Platform lets you rapidly build, scale, govern and optimize production-ready agents grounded in your organization's data. The platform enables developers to build custom or pre-built agents for virtually any use case. New customers get $300 in free credits.
-
Veeam Data Platform v13.1 - Get Your Free TrialTry Veeam Data Platform today. Experience the unified platform that's secure by design, portable by default, and proven to recover clean, fast, and anywhere.
-
1
UCO3D
Uncommon Objects in 3D dataset
...It provides about 170,000 full videos per object instance rather than still frames, along with per-video annotations including object masks, calibrated camera poses, and multiple flavors of point clouds. Each sequence also ships with a precomputed 3D Gaussian Splat reconstruction, enabling fast, differentiable rendering workflows and modern implicit/point-based modeling experiments. The repository includes automated downloaders with checksum verification, fine-grained controls to fetch only selected modalities or super-categories, and a lightweight Python API for loading frames, geometry, and splats on demand. ... -
2
WhisperJAV
Uses Qwen3-ASR, local LLM, Whisper, TEN-VAD
WhisperJAV is an open-source speech transcription pipeline designed specifically for generating subtitles for Japanese adult video content. The project addresses challenges that standard speech recognition models face when transcribing this type of audio, which often includes low signal-to-noise ratios and large numbers of non-verbal vocalizations. Traditional automatic speech recognition systems can misinterpret these sounds as words, leading to inaccurate transcripts. WhisperJAV introduces... -
3
WhisperX
Automatic Speech Recognition with Word-level Timestamps
...Its architecture combines multiple components to enhance both performance and usability in real-world transcription tasks. Overall, whisperx provides a more robust and scalable solution for high-quality speech-to-text applications. -
4
In-The-Wild Jailbreak Prompts on LLMs
A dataset consists of 15,140 ChatGPT prompts from Reddit
...The dataset includes thousands of prompts collected across multiple platforms and represents one of the largest collections of jailbreak attempts available for research. -
Cut Data Warehouse Costs by 54%BigQuery delivers 54% lower TCO with exabyte scale and flexible pricing. Free migration tools handle the SQL translation automatically.
-
5
YuE
Open source AI model for generating full songs from lyrics prompts
...It focuses on transforming text inputs such as lyrics and genre prompts into complete musical compositions that include both vocal and instrumental tracks. Unlike many shorter audio generators, the model is capable of producing songs that last several minutes while maintaining coherent musical structure and alignment with the provided lyrics. YuE introduces a family of models built on large language model architectures that process music generation as a sequence prediction task. YuE also incorporates techniques such as track-decoupled prediction and progressive conditioning to help manage complex audio signals and maintain consistency throughout long compositions. ... -
6
MiniMax H3
MiniMax H3 is a general-purpose, omni-modal generative system
MiniMax H3 is an omni-modal generative system for creating synchronized video and native stereo audio from complex multimodal instructions. It can understand combinations of text, images, video, and audio as generation context. Outputs range from four to fifteen seconds at 24 frames per second, with multiple aspect ratios and resolutions up to 2K. H3-Base supports text-to-video, first-frame, last-frame, and first-and-last-frame generation. Ref2VA accepts multiple reference images, videos, and audio clips for more controlled results. Its architecture uses a unified multimodal sequence and a 33-billion-parameter H3-Omni-Transformer that jointly predicts video and audio latents. ... -
7
Qwen3
Qwen3 is the large language model series developed by Qwen team
...The latest updated version, Qwen3-235B-A22B-Instruct-2507, features significant improvements in instruction-following, reasoning, knowledge coverage, and long-context understanding up to 256K tokens. It delivers higher quality and more helpful text generation across multiple languages and domains, including mathematics, coding, science, and tool usage. Various quantized versions, tools/pipelines provided for inference using quantized formats (e.g. GGUF, etc.). Coverage for many languages in training and usage, alignment with human preferences in open-ended tasks, etc. -
8
face.evoLVe
High-Performance Face Recognition Library on PaddlePaddle & PyTorch
...The project provides a comprehensive framework for building and training modern face recognition models using deep learning architectures. It includes components for face alignment, landmark localization, data preprocessing, and model training pipelines that allow developers to construct end-to-end facial recognition systems. The repository supports multiple neural network backbones such as ResNet, DenseNet, MobileNet, and ShuffleNet, enabling experimentation with different architectures depending on performance requirements. ... -
9
RLHF-Reward-Modeling
Recipes to train reward model for RLHF
...In RLHF pipelines, reward models are responsible for evaluating generated responses and assigning scores that guide the model toward outputs that better match human preferences. The repository provides training recipes and implementations for building reward and preference models using modern machine learning frameworks. It supports multiple optimization strategies commonly used in alignment pipelines, including reinforcement learning with PPO, iterative supervised fine-tuning using rejection sampling, and direct preference optimization methods. The project also includes evaluation results showing that the trained reward models can achieve competitive performance compared with other open-source alignment systems. -
Custom VMs From 1 to 96 vCPUs With 99.95% UptimeLive migration and automatic failover keep workloads online through maintenance. One free e2-micro VM every month.
-
10
HunyuanCustom
Multimodal-Driven Architecture for Customized Video Generation
HunyuanCustom is a multimodal video customization framework by Tencent Hunyuan, aimed at generating customized videos featuring particular subjects (people, characters) under flexible conditions, while maintaining subject/identity consistency. It supports conditioning via image, audio, video, and text, and can perform subject replacement in videos, generate avatars speaking given audio, or combine multiple subject images. The architecture builds on HunyuanVideo, with added modules for... -
11
SimpleHTR
Handwritten Text Recognition (HTR) system implemented with TensorFlow
SimpleHTR is an open-source implementation of a handwriting text recognition system based on deep learning techniques. The project focuses on converting images of handwritten text into machine-readable digital text using neural networks. The system uses a combination of convolutional neural networks and recurrent neural networks to extract visual features and model sequential character patterns in handwriting. It also employs connectionist temporal classification (CTC) to align predicted... -
12
Triton Inference Server
The Triton Inference Server provides an optimized cloud
Triton Inference Server is an open-source inference serving software that streamlines AI inferencing. Triton enables teams to deploy any AI model from multiple deep learning and machine learning frameworks, including TensorRT, TensorFlow, PyTorch, ONNX, OpenVINO, Python, RAPIDS FIL, and more. Triton supports inference across cloud, data center, edge, and embedded devices on NVIDIA GPUs, x86 and ARM CPU, or AWS Inferentia. Triton delivers optimized performance for many query types, including... -
13
Chronos Forecasting
Pretrained (Language) Models for Probabilistic Time Series Forecasting
Chronos is a family of pretrained time series forecasting models based on language model architectures. A time series is transformed into a sequence of tokens via scaling and quantization, and a language model is trained on these tokens using the cross-entropy loss. Once trained, probabilistic forecasts are obtained by sampling multiple future trajectories given the historical context. Chronos models have been trained on a large corpus of publicly available time series data, as well as synthetic data generated using Gaussian processes. -
14
Tiktoken
tiktoken is a fast BPE tokeniser for use with OpenAI's models
tiktoken is a high-performance, tokenizer library (based on byte-pair encoding, BPE) designed for use with OpenAI’s models. It handles encoding and decoding text to token IDs efficiently, with minimal overhead. Because tokenization is a fundamental step in preparing text for models, tiktoken is optimized for speed, memory, and correctness in model contexts (e.g. matching OpenAI’s internal tokenization). The repo supports multiple encodings (e.g. “cl100k_base”) and lets users switch encoding... -
15
BoxMOT
Pluggable SOTA multi-object tracking modules for segmentation
BoxMOT is an open-source framework designed to provide modular implementations of state-of-the-art multi-object tracking algorithms for computer vision applications. The project focuses on the tracking-by-detection paradigm, where objects detected by vision models are continuously tracked across frames in a video sequence. It provides a pluggable architecture that allows developers to combine different object detectors with multiple tracking algorithms without modifying the core codebase. The framework supports integration with detection, segmentation, and pose estimation models that produce bounding box outputs. It also includes evaluation tools and benchmarking pipelines that allow researchers to test tracking performance on standard datasets such as MOT17 and MOT20. ... -
16
Protenix
A trainable PyTorch reproduction of AlphaFold 3
Protenix is an open-source, trainable PyTorch reimplementation of AlphaFold 3, developed by ByteDance with the goal of democratizing high-accuracy protein structure prediction for computational biology and drug-discovery research. Protenix provides a complete pipeline for turning protein sequences (with optional MSA / sequence alignment) or structural inputs (e.g. PDB/CIF) into full 3D atomic-level structure predictions. It supports both “full” models and lightweight variants such as “Protenix-Mini,” offering a trade-off between speed/compute cost and predictive accuracy — making structure prediction accessible even in resource-constrained environments. ... -
17
HivisionIDPhoto
HivisionIDPhotos: a lightweight and efficient AI ID photos tools
HivisionIDPhotos is an open-source AI project designed to automatically generate professional ID photographs from ordinary portrait images. The system uses computer vision and machine learning models to detect faces, segment the subject from the background, and produce standardized identification photos suitable for official documents. It is designed as a lightweight tool that can perform inference offline and run efficiently on CPUs without requiring powerful GPUs. The software analyzes... -
18
Evo 2
Genome modeling and design across all domains of life
...The codebase is focused on local inference and generation through the Vortex inference stack rather than serving as a full training framework alone, although it also points users to training and fine-tuning resources. It supports multiple ways of working with the model, including forward passes, embeddings, generation workflows, notebooks, hosted APIs, and self-hosted deployment through NVIDIA NIM. -
19
HunyuanVideo-Avatar
Tencent Hunyuan Multimodal diffusion transformer (MM-DiT) model
HunyuanVideo-Avatar is a multimodal diffusion transformer (MM-DiT) model by Tencent Hunyuan for animating static avatar images into dynamic, emotion-controllable, and multi-character dialogue videos, conditioned on audio. It addresses challenges of motion realism, identity consistency, and emotional alignment. Innovations include a character image injection module, an Audio Emotion Module for transferring emotion cues, and a Face-Aware Audio Adapter to isolate audio effects on faces, enabling multiple characters to be animated in a scene. Character image injection module for better consistency between training and inference conditioning. ... -
20
Fish Speech
SOTA Open Source TTS
...The repository hosts the code and tooling for training, fine-tuning, and serving high-quality TTS, while the current flagship models (OpenAudio-S1 and S1-mini) are distributed via Fish Audio’s playground and Hugging Face. The models are evaluated with Seed TTS metrics and achieve exceptionally low word and character error rates, indicating strong intelligibility and alignment between text and audio. Fish Speech emphasizes expressive and controllable voices: it supports a long list of emotion tags, tone markers, and special audio effect markers that can be embedded in the text to drive prosody and vocal style, from basic emotions to nuanced states like sarcastic, conciliative, or hysterical. The system is multilingual and cross-lingual, handling multiple languages in a single input without explicit phoneme markup, and is trained on large-scale datasets. -
21
Hephaestus
Semi-Structured Agentic Framework. Workflows build themselves
Hephaestus is an open-source semi-structured agentic framework designed to orchestrate multiple AI agents working together on complex tasks. Instead of relying entirely on predefined workflows, the framework allows agents to dynamically create tasks as they explore a problem space. Developers define high-level phases such as analysis, implementation, and testing, while agents generate specific subtasks within those phases. The system continuously monitors agent behavior and task progression,... -
22
LLMSurvey
A Survey of Large Language Models
...The repository organizes hundreds of research papers into thematic sections that reflect the main areas of LLM research, including model architectures, training strategies, evaluation benchmarks, alignment techniques, and downstream applications. By structuring the literature in a navigable format, LLMSurvey allows researchers and practitioners to quickly explore important publications in the field without manually searching through multiple databases. -
23
DreamO
A Unified Framework for Image Customization
DreamO is a unified, open-source framework from ByteDance for advanced image customization and generation that consolidates multiple “image manipulation” tasks into a single system, rather than requiring separate specialized models. Built on a diffusion-transformer (DiT) backbone, it supports a diverse set of tasks — including identity preservation, virtual “try-on” (e.g. clothing, accessories), style transfer, IP adaptation (objects/characters), and layout/condition-aware customizations —... -
24
VoxelMorph
Unsupervised Learning for Image Registration
...Once the model has been trained, it can rapidly compute the transformation required to register new image pairs, significantly reducing computational time compared to classical registration algorithms. The framework supports both supervised and unsupervised learning approaches and is commonly used in medical imaging applications such as MRI alignment, anatomical analysis, and longitudinal studies. -
25
Qwen2.5-Math
A series of math-specific large language models of our Qwen2 series
Qwen2.5-Math is a series of mathematics-specialized large language models in the Qwen2 family, released by Alibaba’s QwenLM. It includes base models (1.5B / 7B / 72B parameters), instruction-tuned versions, and a reward model (RM) to improve alignment. Unlike its predecessor Qwen2-Math, Qwen2.5-Math supports both Chain-of-Thought (CoT) reasoning and Tool-Integrated Reasoning (TIR) for solving math problems, and works in both Chinese and English. It is optimized for solving mathematical...
