Search Results for "source" - Page 13
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Showing 1444 open source projects for "source"
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SteppedStateMachine
Creates and operates a stepped state machine
Implements a stepped state machine, i.e. a state machine which executes a single state transition at a time. Because of this, no data, e.g. state data, can be stored between executions. Instead, any such data must be stored in persistent storage between executions. This permits operation of the state machine as a CGI program in a web server. A WSGI or fastCGI or other such web server is not required. Received symbols may be received from sources outside the state machine, or may be... -
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COPEread
Connecting Overlapped Pair-End Reads
COPE (Connecting Overlapped Pair-End reads) is a method to align and connect the illumina sequenced Pair-End reads of which the insert size is smaller than the sum of the two read length.The connected reads can be used in genome assembly, resequencing and transcriptome research. The full citation: COPE: An accurate k-mer based pair-end reads connection tool to facilitate genome assembly Binghang Liu; Jianying Yuan; Siu-Ming Yiu; Zhenyu Li; Yinlong Xie; Yanxiang Chen; Yujian Shi; Hao... -
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TreeLayout
Efficient and customizable TreeLayout Algorithm in Java, for NetBeans
Efficiently create compact, highly customizable tree layouts - Based on Walker's algorithm with enhancements suggested by Buchheim, Jünger, and Leipert the software builds tree layouts in linear time. I.e. even trees with many nodes are built fast. Downloads are available at https://sourceforge.net/projects/treelayout/files/. For detailed documentation look at the TreeLayout web site http://treelayout.sourceforge.net/. Development for TreeLayout has moved to... -
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GeoPDEs
A package for Isogeometric Analysis in Octave and Matlab
GeoPDEs is a suite of software tools for research on Isogeometric Analysis of PDEs. GeoPDEs is free software implemented in Octave and fully compatible with Matlab. GeoPDEs is no longer developed at SF, and has moved to GitHub. Please visit http://rafavzqz.github.io/geopdes/ The mailing list will remain active. Releases up to 2.0.4 can be found here. From version 2.1.0 onward, see https://github.com/rafavzqz/geopdes -
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InnoVB .NET Packager
Deploy VB.NET applications quick and easy
InnoVB .NET Packager is the easiest deployment tool for VB.NET applications via Inno Setup. It includes all the Application's dependencies even the COM libraries. Great for hybrid application projects. System Requirements: * .NET Framework 2.0 or later * Windows 2000 or later * 256Mb RAM or higher * 1GHz Processor or higher * Inno Setup 5 or higher NOTICE: Visual Basic .NET is a trademark of Microsoft. Inno Setup is a trademark of Jordan Russel. All trademarks are owned by their... -
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AAARF, written in PERL and with numerous adjustable parameters, identifies sequence overlaps in small shotgun sequence datasets and walks them out to create long pseudomolecules representing the most abundant repeats in a genome.
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kovacs.util (Java numerical classes)
!!! moved to jnum subproject under crush-software !!!
This project has be renamed to jnum and moved under the crush-software project. No further SVN commits here... -
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Generic simple and efficient Fast Fourier Transforms (FFT) implementation using policy-based design and template metaprogramming in C++
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...In addition to accurate quantitation, iMet-Q provides the charge states and isotope ratios of detected compounds. It accepts input data in netCDF, mzXML, and mzML format and exports quantitation results in csv and txt format. The software source code is freely available under the license of GPL2.
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cl-string-match
String matching algorithms implementation for Lisp
Common Lisp provides a SEARCH function to lookup given keys in a string, but its implementation can be subotimal: it can be beaten in some cases by even the simpliest brute-force algorithm. This project is aimed at implementing robust string matching algorithms for Common Lisp. -
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MassWiz
Proteomics MS/MS database search engine
Open Source MS/MS algorithm with integrated target-decoy based FDR. Reference- http://pubs.acs.org/doi/abs/10.1021/pr200031z , Check out the wiki site for help and support - https://sourceforge.net/apps/mediawiki/masswiz/index.php?title=Main_Page -
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Utah Raster Toolkit
The Utah Raster Toolkit 3.0, patchlevel 2
This is the Utah Raster Toolkit distribution version 3.0 of June, 1990. ~~~ librle.a, image.rle file type support, animation, rletogif, converters, many utilities. RLE format supports a great number of raw inner formats for applications to use, known together as .rle (ie, "stored windowing") ~~~ The Utah Raster toolkit is a collection of programs and C routines for dealing with raster images commonly encountered in computer graphics. It provides the following major functions: ... -
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pycrc
CRC C source generator
pycrc is an easy to use CRC (cyclic redundancy check) calculator and C source code generator. The generated source code can be optimized for simplicity, speed or space. pycrc contains a long parameter list of common CRC models. The program is self contained and does not require installation. Apart from a python installation, it does not require other libraries to be installed. -
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mathCollection is a java package representing a consistent and efficient extension to the Java Collection Framework of JDK 1.4. It offers different kinds of sets with mathematical, non-destructive functions.
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Math Tools
Provides useful mathematical tools which make your work much easier.
Math Tools provides mathematical tools, allows you to calculate triangle propeties, and find both parametric and algebraic forms of planes. ------ More Tools Will be Added in The Future ------ ------ Translation to english will be completed soon ------ -
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devFlowCharter is a complete environment for creating program flowchart, source code generation, and compilation. Its main goal is to be straightforward, educational tool for use during procedural programming classes.
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http://www.filehelpers.net The FileHelpers are an easy to use .NET library written in C#. Is designed to read/write data from flat files with fixed length or delimited records (CSV). Also has support to import/export data from different data storages (Excel, Access, SqlServer) Code on GitHub: https://github.com/MarcosMeli/FileHelpers
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Tetris Puzzle Solver
Fills a rectangle using given tetris shapes
Fills a rectangle using given tetris shapes (tetraminos) using an optimized brute force algorithm. A puzzle can have many different solutions; this solver will stop at the first one. Not all puzzles are solveable. Created to solve the annoying tetris puzzles in The Talos Principle and Sigils of Elohim. -
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JGAP is a Genetic Algorithms and Genetic Programming package written in Java. It is designed to require minimum effort to use, but is also designed to be highly modular. JGAP features grid functionality and a lot of examples. Many unit tests included. Legal notice/Impressum: Klaus Meffert An der Struth 25 D-65510 Idstein sourceforge <at> klausmeffert.de
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Javascript-Voronoi
JS implementation of Fortune's algorithm to compute Voronoi cells
This repository implements Steven Fortune’s algorithm (sweep-line method) for generating Voronoi diagrams in JavaScript, providing a performant browser-side solution for computational geometry of planar point sets. With this library you can feed a set of sites (points) and compute their Voronoi cells – the partition of the plane into regions closest to each site – in O(n log n) time. It’s especially useful in web UIs, visualizations, interactive maps, and generative-art contexts where you... -
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SWAPHI-LS: Alignment on Xeon Phi Cluster
Smith-Waterman long DNA sequence alignment on Xeon Phi clusters
The first parallel Smith-Waterman algorithm exploiting Intel Xeon Phi clusters to accelerate the alignment of long DNA sequences. This algorithm is written in C++ (with a set of SIMD intrinsic extensions), OpenMP and MPI. The performance evaluation revealed that our algorithm achieves very stable performance, and yields a performance of up to 30.1 GCUPS on a single Xeon Phi and up to 111.4 GCUPS on four Xeon Phis sharing a host. -
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DJVU++
The DjVu complete solution,with OCR Technology(Arabic ,English).
DjVu++ is a user-friendly program that used to manipulate DjVu file formats such as eBooks with a penalty of editing features. The program introduce a free replacement for the property PDF format with similar resolution and smaller file size DjVu++ also support OCR to handle text in scanned books and images. The program shows good performance for English. In addition to the Arabic language to lead free and commercial software in this area. The main features of DjVu++ program are: o... -
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HitCrypt
Descritografar e Criptografar XMLs do Tribunal de Justiça
O HitCrypt é uma ferramenta que pode ser utilizada para Decryptar o arquivo de Selos e Encryptar. Inicialmente este aplicativo está preparado para funcionar para o tribunal de justiça do estado de Minas Gerais. -
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HeaDDaCHe
Hashed dynamic determinants for convex hulls
Description: We propose and implement in C++ the hashed dynamic determinants scheme. This consists of efficient implementations of dynamic determinant algorithms and a hash table that stores intermediate results (matrices and determinants) in order to be used in subsequent steps of the algorithm. Related papers: V.Fisikopoulos, L.Peñaranda. Faster Geometric Algorithms via Dynamic Determinant Computation. In Algorithms – ESA 2012, Lecture Notes in Computer Science Volume 7501,... -
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That project (RMOL) aims at giving developers concerned by the Revenue Management arena a library delivering a reference implementation for most of the published algorithms and methods. That library is intended to be used in simulated environment: it does not intend to be used in real world production systems.
