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Swiss File Knife - A Command Line Tools Collection
SFK combines many functions in a single, portable executable that belongs onto every USB stick. Search and convert text files, instant simple FTP/HTTP server, find duplicate files, compare folders, treesize, run own commands on all files of a folder - it's all within a single tool.
Scripts used to assemble and deconvolute mixed mitochondrial genomes.
Perl scripts used in the paper "Index-free de novo assembly and deconvolution of mixed mitochondrial genomes" by McComish BJ, Hills SFK, Biggs P and Penny D (2010) Genome Biology and Evolution 2:410-424.