Search Results for "outlier"
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Showing 30 open source projects for "outlier"
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Python Outlier Detection
A Python toolbox for scalable outlier detection
PyOD is a comprehensive and scalable Python toolkit for detecting outlying objects in multivariate data. This exciting yet challenging field is commonly referred as outlier detection or anomaly detection. PyOD includes more than 30 detection algorithms, from classical LOF (SIGMOD 2000) to the latest COPOD (ICDM 2020) and SUOD (MLSys 2021). Since 2017, PyOD [AZNL19] has been successfully used in numerous academic researches and commercial products [AZHC+21, AZNHL19]. PyOD has multiple neural... -
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Alibi Detect
Algorithms for outlier, adversarial and drift detection
Alibi Detect is an open source Python library focused on outlier, adversarial and drift detection. The package aims to cover both online and offline detectors for tabular data, text, images and time series. Both TensorFlow and PyTorch backends are supported for drift detection. -
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Awesome production machine learning
Curated list of awesome open source libraries
This repository contains a curated list of awesome open source libraries that will help you deploy, monitor, version, scale, and secure your production machine learning. Open-source frameworks, tutorials, and articles curated by machine learning professionals. Open-source bias audit toolkits for data scientists, machine learning researchers, and policymakers to audit machine learning models for discrimination and bias, and to make informed and equitable decisions around developing and... -
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hyperfine
A command-line benchmarking tool
A command-line benchmarking tool. Statistical analysis across multiple runs. Support for arbitrary shell commands. Constant feedback about the benchmark progress and current estimates. Warmup runs can be executed before the actual benchmark. Cache-clearing commands can be set up before each timing run. Statistical outlier detection to detect interference from other programs and caching effects. Export results to various formats: CSV, JSON, Markdown, AsciiDoc. Parameterized benchmarks (e.g. vary... -
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HDBSCAN
A high performance implementation of HDBSCAN clustering
HDBSCAN - Hierarchical Density-Based Spatial Clustering of Applications with Noise. Performs DBSCAN over varying epsilon values and integrates the result to find a clustering that gives the best stability over epsilon. This allows HDBSCAN to find clusters of varying densities (unlike DBSCAN), and be more robust to parameter selection. In practice this means that HDBSCAN returns a good clustering straight away with little or no parameter tuning -- and the primary parameter, minimum cluster... -
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Cleanlab
The standard data-centric AI package for data quality and ML
cleanlab helps you clean data and labels by automatically detecting issues in a ML dataset. To facilitate machine learning with messy, real-world data, this data-centric AI package uses your existing models to estimate dataset problems that can be fixed to train even better models. cleanlab cleans your data's labels via state-of-the-art confident learning algorithms, published in this paper and blog. See some of the datasets cleaned with cleanlab at labelerrors.com. This package helps you... -
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MOA - Massive Online Analysis
Big Data Stream Analytics Framework.
A framework for learning from a continuous supply of examples, a data stream. Includes classification, regression, clustering, outlier detection and recommender systems. Related to the WEKA project, also written in Java, while scaling to adaptive large scale machine learning. -
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Feature-engine
Feature engineering package with sklearn like functionality
Feature-engine is a Python library with multiple transformers to engineer and select features for use in machine learning models. Feature-engine's transformers follow Scikit-learn's functionality with fit() and transform() methods to learn the transforming parameters from the data and then transform it. -
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photo-z CO binary classifier
A binary classifier neural network to identify cat. outier photo-zs
This strategy of binary classification to identify catastrophic outliers is presented in “Machine Learning Classification to Identify Catastrophic Outlier Photometric Redshift Estimates.” J. Singal, G. Silverman, E. Jones, T. Do, B. Boscoe, and Y. Wan, 2022, Astrophysical Journal, 928, 6 This package contains Jupyter notebooks and supporting files which do the following: - Perform a neural network regression to estimate photo-zs (photoz_regression_mlp.ipynb) - Take a data set... -
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Reliable Metrics for Generative Models
Code base for the precision, recall, density, and coverage metrics
Reliable Fidelity and Diversity Metrics for Generative Models (ICML 2020). Devising indicative evaluation metrics for the image generation task remains an open problem. The most widely used metric for measuring the similarity between real and generated images has been the Fréchet Inception Distance (FID) score. Because it does not differentiate the fidelity and diversity aspects of the generated images, recent papers have introduced variants of precision and recall metrics to diagnose those... -
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awesome-TS-anomaly-detection
List of tools & datasets for anomaly detection on time-series data
All lists are in alphabetical order. In the lists, maintained projects are prioritized vs not mantained. A repository is considered "not maintained" if the latest commit is > 1 year old, or explicitly mentioned by the authors. -
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MoPAC
The Modular Pipeline for the Analysis of CRISPR screens
To facilitate the comparison of gene essentialities in two or more cell samples, we propose MoPAC (Modular Pipeline for Analysis of CRISPR screens), a Shiny-driven interactive tool for differential essentiality analysis in CRISPR/Cas9 screens. For installation and usage instructions please refer to the wiki page. -
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Skalli
IVS & ILRS Reference Point Determination
Skalli is a simple tool to estimate the IVS (International VLBI Service for Geodesy and Astrometry) and ILRS (International Laser Ranging Service) reference point of a radio or laser telescope. -
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JPIV
Particle Image Velocimetry
JPIV is a platform independent, graphical stand-alone application for Particle Image Velocimetry (PIV) written in Java. PIV is an optical technique for measuring fluid flow velocities. JPIV moved to GitHub. Please visit us at: https://eguvep.github.io/jpiv/ -
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L1-norm-robust-regression
linear regression on the basis of minimal absolute deviations error
This software provides a Fortran95 implemented routine to call and obtain the L1-norm regression coefficients. The "standard" linear regression minimizes the squared error. (L2-norm-regression). It allows for a simple solution process, hence its popularity. But it is not robust to outlier points. L1-norm regression is robust with respect to outliers but the solution algorithm is more difficult. It minimizes the sum of absolute deviations. -
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EDM Calibration Baseline Fitting
EDMFit is an adjustment tool to estimate EDM calibration parameters.
An EDM calibration baseline is used to derive specific instrument errors of the electronic distance measurement (EDM) unit of a total station. EDMFit is a simple adjustment tool to estimate the EDM calibration parameters (addition constant and/or scale parameter). The adjustment process is according to ISO 17123-4. The parameters are checked for significance, to avoid an overestimation. Based on two classical hypothesis testing, EDMFit provides a reliable outlier detection -
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UMAD
Universal Management and Analysis of Data
The project mainly includes three parts:similarity searching,classfication and outlier detection. All those three methods are based on data items in metric space, which contains complex objects like picture,video,DNA,protein and so on, it will consumes large amount of cpu time to calculate out the distance between any two complex objects shown before.Our methods in the project reduces the times of distance calculation and improves the effectiveness of data retrieval. -
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ilodids
Incremental and local outlier detection
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NOFI ranking
The Non-Outlier Fragment Ion ranking for enhaced DIA quantification
... to represent each fragment ion as a vector. 3) Multivariate outlier detection techniques are used to rank all the fragment ions from each peptide. 4) Several figures are generated (a pdf file) to visualize the effect of the Top-N fragment ions over different indicators. 5) The user can choose the number of top fragment ions per peptide, thereby utilizing the optimal subset of high priority Top-N NOFIs for quantification while excluding the impaired fragment ions. -
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Cenobi
cost estimation and management accounting, using neural networks
Cenobi is designed for management accountants, not (only) for statisticians and data mining experts. Carefully arranged default settings make sure you can concentrate on Cenobi's many accounting features rather than worrying about setting up artificial neural networks or genetic algorithms, which are the main machine learning tools under Cenobi's hood. Cenobi's main benefits are: - ease of use - Utilizing artificial neural networks to estimate cost relationships, Cenobi is able to... -
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FRAFS Bench Viewer
Simple viewer for Fraps 'frametimes' benchmark results
Fraps has the ability to tell us the amount of time each frame took to display. With this program, it becomes easy to view this information as a chart, in overview or in fine detail. Hopefully this will help the Fraps user community to spot troublesome hardware or software setups. -
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Database Quality Management
Calculates the probability that two (pairs of0 vectors are simliar
... erent, DQM also calculates whether it is more likely the dis-similaries are due to general di fferences, or if there exists a single outlying number or pair. Further, if an outlier is shown to be responsible for the dis-similarity, DQM determines whether the outlying number or pair's ratio is an excess or de ficit. -
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FishingCNV
Copy number variation (CNV) detection in exome sequencing data
FishingCNV, a software tool developed at McGill University, is a tool for comprehensive analysis of rare copy number variations in high-throughput exome sequencing data. The inputs are standard coverage files produced by Genome Analysis ToolKit (GATK), and the output is a file containing putative CNVs. The program comes in 2 different releases * GUI version (FishingCNV_X.X.X.zip) * Command line version (FishingCNV_X.X_pipeline) Browse through our files to find the different releases. -
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feed4weka is an open library that enriches weka (http://www.cs.waikato.ac.nz/ml/weka/), an open source project for data analysis. It integrates new classification and clustering algorithms, and adds the coclustering and outlier detection frameworks
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weka outlier is an implementation of outlier detection algorithms for WEKA. CODB (Class Outliers: Distance-Based) Algorithm is the first algorithm developed using WEKA framework.