Search Results for "name of gene"

Remix Icon is a set of open-source neutral-style system symbols for designers and developers. Unlike a patchwork icon library, 2400+ icons are all elaborately crafted so that they are born with the gene of readability, consistency and perfect pixels. Each icon was designed in "Outlined" and "Filled" styles based on a 24x24 grid. Of course, all the icons are free for both personal and commercial use. Open-source neutral-style system symbols are elaborately crafted for designers and developers...

The Cylindrical Alignment App is the successor to Cylindrical BLAST Viewer. Similarly, it arranges search or other comparisons, against their "axis". Searches can be made by Basic Local Alignment Search Tool, ClustalW, or Gene Machine to name a few. This version does not require downloading or installing Java3D, and has more modern GUI features.

Genome annotation conceptually consists of inferring and assigning biological information to gene products. Over the years, numerous pipelines and computational tools have been developed aiming to automate this task and assist researchers in gaining knowledge about target genes of study. However, even with these technological advances, manual annotation or manual curation is necessary. To assist with this problem, we present CODON, a tool for the prediction, annotation, and manual curation...

Here we provide a suite of bash scripts that were used to identify, download and screen for gene name errors in Excel files that are published as supplementary files in academic journals as well as the NCBI GEO database. These were run on Ubuntu 14.04 LTS.

REDO is a comprehensive application tool for identifying RNA editing events in organelles based on variant call results (VCF files). It is a suite of Perl scripts and can work easily and directly in any operating system installed Perl and R Environment. The stringent rule depended filters and statistical filters are used in REDO for reducing false positive rate. It can provide detailed annotations, statistics and figures for RNA editing sites. REDO also can detect RNA editing events in...

LocusVu is a novel Java based software tool that accepts a list of genomic loci (positions on the chromosome) as input and automates fetching of related information (cytogenetic band, gene name, OMIM data etc.) from public databases such as the UCSC genome browser database. It then enables multiple workflows on the retrieved results, like comparing multiple datasets (comparative genomics), viewing neighboring genes for a loci from within the tool itself, or graphically representing...