Showing 7 open source projects for "gale"

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  • 1
    Downloads: 3 This Week
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  • 2
    Ordinary's Gale/Gust Stuff

    Ordinary's Gale/Gust Stuff

    OrdinaryEnder's gale/gust Builds

    Downloads: 0 This Week
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  • 3
    Downloads: 7 This Week
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  • 4

    chipexo

    model based analysis of ChIP-exo data

    ...MACExo has the following four steps: 1) sequencing data normalization and bias correction; 2) signal consolidation and noise reduction; 3) single nucleotide resolution border detection using Chebyshev Inequality; and 4) border matching using Gale-Shapley’s stable matching algorithm. When applied to yeast Reb1 and human CTCF ChIP-exo data, MACE is able to define TFBSs with higher sensitivity, specificity and spatial resolution, as evidenced by multiple criteria, such as motif enrichment, sequence conservation, nucleosome positioning, and open chromatin states.
    Downloads: 2 This Week
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  • 5

    CCH

    A genetics tool that identifies genomic regions of shared ancestry

    ...The associated publication regarding CCH may be accessed here: http://www.biomedcentral.com/1471-2164/16/163 If you use CCH please cite: Levine AP, Connor TM, Oygar DD, Neild GH, Segal AW, Maxwell PH, Gale DP. Combinatorial Conflicting Homozygosity (CCH) analysis enables the rapid identification of shared genomic regions in the presence of multiple phenocopies. BMC Genomics. 2015 Dec;16(1):1360. doi: 10.1186/s12864-015-1360-4. Epub 2015 Mar 10.
    Downloads: 0 This Week
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  • 6

    Chocoholic

    Game solver for Chomp

    Chomp is a game invented by D Gale in 1974. It can be played in arbitrary-sized arenas, so there is no single solution, but a game of any size is a proper subset of all larger games. This project produces a solution for any arena you select, provided you have time and disk space enough.
    Downloads: 0 This Week
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  • 7
    Praya is a window to all your messages. It ships with many protocols, including DICT, IRC, gale, Maildir, a timer, and Yahoo! Pager. Praya is easily extendible. Adding new protocols is relatively straightforward. It has a modular architecture which makes
    Downloads: 3 This Week
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