Search Results for "code alignment"
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Showing 38 open source projects for "code alignment"
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Face Alignment
2D and 3D Face alignment library build using pytorch
Detect facial landmarks from Python using the world's most accurate face alignment network, capable of detecting points in both 2D and 3D coordinates. Build using FAN's state-of-the-art deep learning-based face alignment method. For numerical evaluations, it is highly recommended to use the lua version which uses identical models with the ones evaluated in the paper. More models will be added soon. By default, the package will use the SFD face detector. However, the users can alternatively use... -
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InsightFace
State-of-the-art 2D and 3D Face Analysis Project
State-of-the-art deep face analysis library. InsightFace is an open-source 2D&3D deep face analysis library. InsightFace is an integrated Python library for 2D&3D face analysis. InsightFace efficiently implements a wide variety of state-of-the-art algorithms for face recognition, face detection, and face alignment, which are optimized for both training and deployment. Research institutes and industrial organizations can get benefits from InsightFace library. -
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JavaCV
Java interface to OpenCV, FFmpeg, and more
...-to-use methods to execute code in parallel on multiple cores (Parallel), user-friendly geometric and color calibration of cameras and projectors (GeometricCalibrator, ProCamGeometricCalibrator, ProCamColorCalibrator), detection and matching of feature points (ObjectFinder), a set of classes that implement direct image alignment of projector-camera systems (mainly GNImageAligner, ProjectiveTransformer, ProjectiveColorTransformer, ProCamTransformer, and ReflectanceInitializer), and more. -
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Open3D
A modern library for 3D data processing
Open3D is an open-source library that supports rapid development of software that deals with 3D data. The Open3D frontend exposes a set of carefully selected data structures and algorithms in both C++ and Python. The backend is highly optimized and is set up for parallelization. Open3D was developed from a clean slate with a small and carefully considered set of dependencies. It can be set up on different platforms and compiled from source with minimal effort. The code is clean, consistently... -
Evolia is a web and mobile platform that connects enterprises with 1000’s of local shift workers and offers free workforce scheduling and time and attendance solutions. Is your business on Evolia?
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amrlib
A python library that makes AMR parsing, generation and visualization
... in both the GUI and as library functions. Training and test code for both the StoG and GtoS models. A SpaCy extension that allows direct conversion of SpaCy Docs and Spans to AMR graphs. Sentence to Graph alignment routines FAA_Aligner (Fast_Align Algorithm), based on the ISI aligner code detailed in this paper. RBW_Aligner (Rule Based Word) for a simple, single token to single node alignment. -
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OpenFold
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction
OpenFold carefully reproduces (almost) all of the features of the original open source inference code (v2.0.1). The sole exception is model ensembling, which fared poorly in DeepMind's own ablation testing and is being phased out in future DeepMind experiments. It is omitted here for the sake of reducing clutter. In cases where the Nature paper differs from the source, we always defer to the latter. OpenFold is trainable in full precision, half precision, or bfloat16 with or without DeepSpeed... -
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OpenNMT-tf
Neural machine translation and sequence learning using TensorFlow
OpenNMT is an open-source ecosystem for neural machine translation and neural sequence learning. OpenNMT-tf is a general-purpose sequence learning toolkit using TensorFlow 2. While neural machine translation is the main target task, it has been designed to more generally support sequence-to-sequence mapping, sequence tagging, sequence classification, language modeling. Models are described with code to allow training custom architectures and overriding default behavior. For example... -
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SimpleITK
A layer built on top of the Insight Toolkit (ITK)
SimpleITK is an image analysis toolkit with a large number of components supporting general filtering operations, image segmentation and registration. It is built on top of the Insight Segmentation and Registration Toolkit ITK with the intent of providing a simplified interface to ITK. SimpleITK itself is written in C++ but is available for a large number of programming languages. Wrapping of the C++ code is accomplished through SWIG, in principle, any language wrapped by SWIG should... -
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CPT
CPT: A Pre-Trained Unbalanced Transformer
... initialize the new version of models with the old version of checkpoints with vocabulary alignment. Token embeddings found in the old checkpoints are copied. And other newly added parameters are randomly initialized. We further train the new CPT & Chinese BART 50K steps with batch size 2048, max-seq-length 1024, peak learning rate 2e-5, and warmup ratio 0.1. Aiming to unify both NLU and NLG tasks, We propose a novel Chinese Pre-trained Un-balanced Transformer (CPT). -
SafetyIQ is revolutionizing the way businesses approach safety. As a leading provider of comprehensive workplace safety software, we cater to four key areas: Mobile Worker Safety, EHS (Environment, Health, and Safety), Fatigue Management, and Training. Our platform is designed to safeguard your workers, no matter their location or task, ensuring all-around safety compliance. Unlike most safety software providers that only react to incidents or implement proactive measures, SafetyIQ introduces a third pillar to safety management - predictive analytics. We transform the untapped wealth of safety data within your organization into actionable insights to inform safety strategies, mitigating risks even before they aris
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SAM (Sequence Alignment/Map) is a flexible generic format for storing nucleotide sequence alignment. SAMtools provide efficient utilities on manipulating alignments in the SAM format. The main samtools source code repository moved to GitHub in March 2012. For ongoing development since then, see http://github.com/samtools/samtools
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miRDeep*
MiRDeep*
Please cite: An, J., Lai, J., Lehman, M.L. and Nelson, C.C. (2013) miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data. Nucleic Acids Res, 41, 727-737. We will create index for you if you tell us your interested species (j.an@qut.edu.au). download command line version "MDS_command_line_Vxx.zip" clicking "Browse All Files" please find miRPlant in sourceforge for plant miRNA prediction. -
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comer2
COMER2, cross-platform software for protein remote homology search
The COMER method based on sequence profile-profile comparison is one of the most sensitive and accurate computational tools developed for protein alignment and homology search. COMER version 2.1 (COMER2) represents one of the fastest implementations of calculations for sensitive protein homology search. High COMER2 performance is achieved by harnessing the power of the Graphics processing unit (GPU). Hence, a GPU is expected to be installed on the system. The files include the compressed... -
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E-XD-SVG-Source-Code
Add SVG Loading Saving and Editing feature to your application, C++
Add SVG Loading Saving and Editing feature to your application, with complete C++ Source Codes, supports From Visual Studio 6 to Visual Studio 2022. Download it with: http://www.ucancode.net The basic functions are as follows: 1), you can open the vector SVG file. 2), you can directly edit the SVG graphics. 3), provides a variety of advanced vector operation functions, such as geometric operations, path curves, alignment, interrupts, and so on. 4), can be exported to SVG format... -
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Virtual Reflectometer
Simulates basic reflectometer scans with X ray tracing.
With Virtual Reflectometer (VR), you can simulate the basic alignment scans of a basic X ray reflectometer (diffractometer) with a Goebel mirror using ray tracing. With this program, you can characterize reflectometers and get a reflectometer-dependent overillumination correction for X Ray Reflectivity (XRR) scans. The pogram serves as an educational tool for explaining alignment and for a proper overillumination correction of XRR data. !!Paper will be referenced!!. VR can be run by code... -
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TNN
Uniform deep learning inference framework for mobile
TNN, a high-performance, lightweight neural network inference framework open sourced by Tencent Youtu Lab. It also has many outstanding advantages such as cross-platform, high performance, model compression, and code tailoring. The TNN framework further strengthens the support and performance optimization of mobile devices on the basis of the original Rapidnet and ncnn frameworks. At the same time, it refers to the high performance and good scalability characteristics of the industry's... -
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gendasm
Generic Code-Seeking Diassembler with Fuzzy-Function Analyzer
GenDasm is a Generic Code-Seeking Diassembler engine. It allows you to enter known starting vectors for a given code image for the micro. It will disassemble the code and follow through branches to assist in the separation of code and data. Its included Fuzzy Function Analyzer companion uses a DNA Sequence Alignment Algorithm to locate similar code in multiple binaries to facilitate reverse-engineering and/or code recovery. The original purpose of the Fuzzy Function Analyzer was to assist... -
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m6811dis
M6811 Code-Seeking Disassembler
The M6811 Code-Seeking Disassembler is a command-line tool that lets you enter known starting vectors for a given code image for the 6811 micro. It will disassemble the code and follow through branches to assist in the separation of code and data. Its companion Fuzzy Function Analyzer uses DNA Sequence Alignment Algorithms to locate similar code in multiple binaries, facilitating reverse-engineering. Originally written to analyze code from GM automotive engine controllers, but is useful... -
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nCine
A cross-platform 2D game engine
nCine is a cross-platform 2D game engine that runs on PC (Linux, Windows, macOS), Android, Raspberry Pi, and the web (Emscripten). The project has been in active development since June 2011. Source code is released under the MIT license and is available on GitHub. Visit the donate page to discover different ways to support and sponsor the project. Join the Discord server and meet the community of developers, users and players. Indent with tabs (4 spaces) but use spaces for continuation line... -
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TaxOnTree
A program for associating taxonomic information in a phylogenetic tree
TaxOnTree is a phylogenetic program for associating Taxonomic information in a phylogenetic tree. The output is a NEX format tree file configured to be opened in FigTree, that users can promptly color by any taxa or by the ancestrality shared by sequences with query. Input can be a Fasta formatted file to be used in a BLAST search or a list of sequences represented by their identifiers (UniProtAC or NCBI gi), if a cluster is already available. Also, a newick file produced with user software... -
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arkwrt
A CLI tool for concepts defined in the ArchiMate® 2.1 specification
Arkwrt is a CLI (command-line interface) tool that provides a partial implementation of the ArchiMate® 2.1 Specification (ISBN: 978-94-018-0003-7). Arkwrt's creation was inspired by the The UNIX® philosophy that emphasizes building simple, short, clear, modular, and extensible code, that can be easily maintained and re-purposed by developers other than its creators. The UNIX® philosophy favours composability as opposed to monolithic design (see https://en.wikipedia.org/wiki/Unix_philosophy... -
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adapter trimmer
We implement a very simple approach. Each read is searched for the jun
We implement a very simple approach. Each read is searched for the junction adapter (CTGTCTCTTATACACATCT) and its reverse complement (AGATGTGTATAAGAGACAG) based on Hamming distance, the entire junction being CTGTCTCTTATACACATCT+AGATGTGTATAAGAGACAG. If a match to either side of the junction is found then the entire 38bp juncton is clipped. This means the algorithm can tolerate an indel error in one of the sides of the junction, but not both. Optionally Smith-Waterman alignment can be turned... -
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FOCUS
A model to identify organisms present in metagenomes in seconds
FOCUS, an innovative and agile composition based using non-negative least squares to profile and report abundant organisms present in me-tagenomic samples and their relative abundance without sequence length dependencies. The program was tested with simulated and real metagenomes, and the results show that our approach predicts the organisms in random communities. Availability and implementation: The code implemented in Python can be found here and a web-sever at http://edwards.sdsu.edu... -
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UKanDo Viewer
Yet Another Second Life Viewer
UKanDo (Pronounced: U-can-do), is based on the latest viewer-release code supplied by Linden Lab™. UKanDo gives a whole new perspective in Second life by using a camera placement adopted by the vast majority of third person video games. Also includes RLV along with plenty of other useful tools. It won’t have all the gadgets/gizmos a lot of the bigger viewers have, the aim is to keep it as lite as possible with only the fixes, gadgets and gizmos we need to keeping the Viewer stable and up... -
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The"Amip" GUI is intended to provide code examples of the methods proposed in: "Unsupervised image segmentation for microarray spots with irregular contours and inner holes" authors: Bogdan Belean, Monica Borda, Jörg Ackermann, Ina Koch and Ovidiu Balacescu Journal: BMC Bioinformatics, 2015, 16:412 https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-015-0842-3 PDE were used for grid alignment, whereas autocorrelation driven PDE and k-means clustering were used...
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iMet-Q (intelligent Metabolomic Quantitation) is an automated tool with friendly user interfaces for quantifying metabolites in full-scan liquid chromatography-mass spectrometry (LC-MS) data. It has a complete quantitation procedure for noise removal, peak detection and peak alignment. In addition to accurate quantitation, iMet-Q provides the charge states and isotope ratios of detected compounds. It accepts input data in netCDF, mzXML, and mzML format and exports quantitation results in csv...