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Showing 9 open source projects for "calcium"

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1

FCS mini

FCS mini is the free software for the analysis of Flow cytometry data

FCS mini is the software for FACS (Flow cytometry) analysis. It works on windows 10, 11. English and Korean languages are supported (each version exists). Just unzip the FCS_mini~.zip and double click the FCS_mini.exe inside the FCS_mini folder. You can find the tutorial video here ( https://youtu.be/iOxnx1OKJr8 for English subtitle, and https://youtu.be/ygQhh2AE2Q4 for Korean subtitle - 한글판 - ). This is freeware ; however, distribution, modification, reverse engineering, and any...

Downloads: 3 This Week

Last Update: 1 day ago
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2

IAPP

Scripts and programs (e. g. CaTE) for work in IAPP

Scripts for evaluation and whole programs for measurements from work in "Institut für Angewandte Photophysik (www.iapp.de). The main work was "CaTE - Calcium Test Evaluation" (see Files).

Downloads: 0 This Week

Last Update: 2017-05-03
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3

MicroMos

To automatically obtain mosaics of partially overlapping images.

...For more details, please, read: a) F. Piccinini, M. Pierini, E. Lucarelli, A. Bevilacqua, Semi-quantitative monitoring of confluence of adherent mesenchymal stromal cells on calcium-phosphate granules by using widefield microscopy images. Journal of Materials Science: Materials in Medicine, 25(10):2395-2410, October 2014. 2) F. Piccinini, A. Bevilacqua, E. Lucarelli, Automated image mosaics by non-automated light microscopes: the MicroMos software tool. Journal of Microscopy, 252(3):226-250, December 2013.

Downloads: 4 This Week

Last Update: 2017-05-08
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4

MineralBioavailabilityUtility

DLL for stochastic simulation of Minerals (Iron, Calcium and Zinc)

This is a library (DLL) for Mineral Bioavailability Utility for optimization and generating chemical results and gives the output of data such as Iron, Calcium and Zinc. On the other hand, even when the data set consists of precise measurements, some methods introduce randomness into the search-process to accelerate progress.

Downloads: 0 This Week

Last Update: 2016-03-25
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5

EONS v1.2

Elementary Objects of the Nervous System

...This platform consists of a graphical interface in which elements that comprise a single glutamatergic synapse (both pre- and post-synaptically), their behavior as well as the underlying synaptic geometry can be modified. For example, EONS offers the ability to study the effect of voltage-gated calcium channels density and distribution, the number and location of receptors and more.

Downloads: 0 This Week

Last Update: 2015-09-15
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6

ImageComponentParser

Matlab tool for automated analysis of Voltage and Calcium Imaging Data

The ImageComoponentParser is a matlab tool for automated analysis of Voltage and Calcium Imaging Data. The main functionality is automated extraction of component signals using PCA and ICA. The GUI enables the user to alter the settings, browse the components, manually remove artifacts, and visualize functional activity.

Downloads: 0 This Week

Last Update: 2016-11-29
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7

SpikeAnalyzer

SpikeAnalyzer is a program for calcium spikes analysis

SpikeAnalyzer is a semiautomatic program for analysis of calcium spikes in cardiac myocytes created in the MATLAB environment. The analysis parameters are automatically initialized upon loading the electrophysiological and confocal data in their respective proprietary formats (confocal data - .tif, electrophysiological data – .abf ver. 2.0). The analysis starts with interactive selection of spike positions and determining their temporal fluorescence profiles.

Downloads: 0 This Week

Last Update: 2015-04-15
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8

KYM 0.5

KYM is a MATLAB / GNU Octave set of functions that implements a wavelet-based automated procedure of quantification and characterization of biological signals. In particular it has been thought for the analysis of the oscillatory component of cytosolic calcium concentration time course.

Downloads: 0 This Week

Last Update: 2014-06-29
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9

Cell++

A novel stochastic simulation environment for biochemical modeling

UPDATE(2017-07-24) This repository has moved to BitBucket: https://bitbucket.org/parkinsonlab/cell-2017 Cell++ is a novel stochastic simulation environment which is capable of modeling diverse biochemical phenomena including signal transduction pathways, metabolic pathways and intracellular calcium signaling.

Downloads: 0 This Week

Last Update: 2017-07-24
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