altanalyze
Alternative splicing and functional prediction analysis tool
...All you will need are your junction/exon read or microarray files along with some simple descriptions of the conditions that you're analyzing. RNASeq support is introduced in AltAnalyze 2.0.
AltAnalyze documentation, installers are provided on this website as well as at http://www.altanalyze.org. For questions not addressed here, please co