Search Results for "python tool" - Page 67
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Showing 2838 open source projects for "python tool"
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SAT-Assembler
Scalable and accurate targeted gene assembly for large-scale NGS data
SAT-Assembler is a scalable and accurate gene assembly tool for large-scale RNA-Seq and metagenomic data. It recovers genes from gene families of particular interest to biologists with high coverage, low chimera rate, and extremely low memory usage compared with exiting gene assembly tools. Moreover, it is naturally compatible with parallel computing platforms. -
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The SOSETSUKEN Engine
Need Vinesauce ROM Corrupter parameters? Yeah, we got that.
The SOSETSUKEN Engine is a handy tool for generating corruption parameters for use with the Vinesauce ROM Corrupter. You simply feed it the end byte found by Auto End, the level of corruption, and the amount of sets you want to generate. Its only throttle is the speed of your PC and the space left on your hard drive. This thing is fast, simple and small. It even puts out how long it takes to generate the requested sets at the very bottom of "params.txt" (the output file). Changelog: v1.2:... -
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PortOpt
A portfolio-optimizer using Markowitz(1952) mean-variance model
PortOpt [Portfolio Optimizer] is a C++ program (with Python binding) implementing the Markowitz(1952) mean-variance model with agent's linear indifference curves toward risk in order to find the optimal assets portfolio under risk. You have to provide PortOpt (in text files or - if you use the api - using your own code) the variance/covariance matrix of the assets, their average returns and the agent risk preference. -
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ncPRO-seq
Non-Coding RNA PROfiling from sRNA-seq
ncPRO-seq is a tool for annotation and profiling of ncRNAs from smallRNA sequencing data. It aims to interrogate and perform detailed analysis on small RNAs derived from annotated non-coding regions in miRBase, piRBase, Rfam and repeatMasker, and regions defined by users. The ncPRO pipeline also has a module to identify regions significantly enriched with short reads that can not be classified as known ncRNA families. ############# Docker version : download and run Dockerfile (go in... -
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5
pyCompry
A Python Script to Compress and Backup a Folder
This tool is featured with a very high compression mechanism hence useful in backing up large sized folders over a slow network, Or useful in reducing the backup size to a maximum possible. For detailed help, please refer to http://blogger.iamamazing.in/2016/01/automate-backup-with-python-script.html -
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SeriesMarker
A TV series browser and tracker application.
SeriesMarker is a tool that lets you keep track of watched episodes of your favorite TV series. Please visit the project site for more information: -
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ENLY
Bioinformatic tool to improve draft genome assemblies by closing gaps
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nogotofail
An on-path blackbox network traffic security testing tool
nogotofail is a network security testing tool developed by Google to help developers and researchers identify weaknesses in TLS/SSL implementations and detect unencrypted traffic that could compromise sensitive data. The tool functions as an on-path man-in-the-middle (MiTM) testing system, allowing users to inspect and evaluate how applications and devices handle encrypted connections under real-world conditions. It can detect a wide range of vulnerabilities, including improper SSL... -
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MaeBlok
Rapid web development tool for business applications
You assemble *blocks* in your django template, with each block wired to a tastypie resource, which in turn is mapped to a django model. Each *block* will reside in a dijit ContentPane which you must define in your template. You have a choice of 2 layouts for each *block*, Form or Grid based. Form displays a single record in either a 1, 2 or 3 column layout while Grid displays many rows in a spreadsheet like grid. You can perform edits in place on fields in both layouts. You can... -
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wltest.py
Analysis of images from Winston-Lutz Test (images in DICOM-RT format)
free software tool to analyse portal images from linear accelerator regarding Winston-Lutz-Test (analyzing unlimited number of images): 1. script reads DICOM-RT file of Winston-Lutz data (sphere+mlc gradient information from linear accelerator) 2. x- and y-shift shift is calculated relative to beam direction 3. results saved (see screenshots): green-passed (<0.75mm); yellow(0.75...1mm); red (not passed: >1mm) you need python with following packages: import numpy as np import pylab as plt from scipy import interpolate import dicom as dcm import sys,os in case of problems, please send a mail to hannes.rennau@uni-rostock.de (Department of Radiation Therapy, University of Rostock). i made the code run for several people who asked for it already. ... -
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SciEnPlot
Data Plotting and Analysis for Science and Engineering
.... - Special functions - Drag and drop data files - Python console is back (since v1.3.3), capable of reusing column data - Debye and Guinier models for SANS / SAX data - More apps in our Web below -
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NoSQLMap
Automated NoSQL database enumeration and web application exploitation
A security tool for detecting and exploiting vulnerabilities in NoSQL databases, similar to SQLMap for traditional databases. -
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ChIP-RNA-seqPRO
ChIP-RNA-sequencing-processing (ChIP-RNA-seqPRO)
ChIP-RNA-seqPRO: A strategy for identifying regions of epigenetic deregulation associated with aberrant transcript splicing and RNA-editing sites. Runnable python scripts packaged together with customized annotation libraries, demo data input and README guide. 9/26 : v1.1 Updated MAIN_IV to debug error thrown by python pandas no longer supporting 'subset'. This code will no longer be actively maintained/updated here. A cloud-based resource for comparative analysis of epigenetic,... -
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pipsi
pip script installer
pipsi is an older Python command-line tool for installing Python packages that expose global scripts. Its name stands for “pip script installer.” Instead of installing command-line packages into the system Python environment, it places each package into its own isolated virtualenv. It then symlinks the installed scripts into a user-level binary directory, allowing commands to run globally without using sudo. -
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Detekt
Malware triaging tool
Detekt is a free Python tool that scans your Windows computer (using Yara, Volatility and Winpmem) for traces of malware. Specifically, it can detect the presence of pre-defined patterns which are unique identifiers of commercial surveillance spyware FinFisher FinSpy and HackingTeam RCS. Note however, that Detekt may not be able to detect the most recent versions of those malware families. -
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RAMBO-K
Read Assignment Method Based On K-mers
RAMBO-K is a tool for rapid and sensitive removal of background sequences from Next Generation Sequencing data. Please cite our publication (http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0137896) if you use RAMBO-K. We moved to GitLab, please visit our homepage for latest development. The latest stable versions of RAMBO-K will still be provided here. -
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MultiPlink
[UPDATE 28-10-2015] FINAL MULTIPLINK SSH LIFETIME v2.0 UP-5 "FAREWELL"
Download Link Utama: http://sourceforge.net/projects/multiplink/files/Final_MultiPlink_SSHLIFETIME_2.0_UP-5_FAREWELL.rar/download Jika di Halaman Download, Link belum tersedia, klik link alternatif : https://www.dropbox.com/s/znptxp2gxhihpax/Final_MultiPlink_SSHLIFETIME_2.0_UP-5_FAREWELL.rar?dl=0 Lalu Download & Install juga Minor... -
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PyLogAnalyser
A Python multiplatform tool to filter, colorise and analyse logs
...The final goal of this tool is to ameliorate reading long and difficult b/w logs, speed up the analysis and enhance day to day wearying activities. As common application, you can colorise adb logcat logs taking the example files and using them (and also, filter unnecessary lines). You can INSTALL it from PyPI: $ python -m pip install pyloganalyser -
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PyToCs
Translates Python to C#
A tool that translates Python source code to C#. -
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SWAPY
pywinauto Inspector and Code generator
Swapy-ob is a tool for GUI Automation for Windows. Finally you will get native python code for pywinauto module. -
21
swot
Identify email addresses or domains names that belong to colleges
swot is a curated list and Python tool to check if strings or email domains are part of academic institutions. Useful for sites needing to verify .edu or school-affiliated domains, it contains tens of thousands of entries. The library supports lookup functions and regex patterns for validation, and there are wrappers in multiple languages like Node.js or Ruby, making it useful in registration or academic verification workflows. -
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QCyclingPower
Obtain your cycling power
QCyclingPower is a usefull tool that allow you to calculate your cycling power using GPS Tracks (GPX/KML). You'll be able to compare different tracks. Today the tool cannot be used. Go on wiki page for more detailed state of the project. No time line defined by the way. I'm not crazy. -
23
Ones and Zeros
Binary clock with transparent background
Minimalistic binary clock with a transparent background, written in Python using the GTK3 tool kit. Add compiz window rules (or equivalent) for skipping the pager, sticking below, etc. if you'd like. -
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µIRC
Lightweight Internet Relay Chat tool package
microIRC is a yet another simple C / C++ / Python IRC client and client daemon. -
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Graphical tool for managing database of geocaches and waypoints, importing GPX files and exporting geocaches to many formats including GPX, POI, HTML and others.
