Search Results for "gnu science" - Page 54
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Showing 11014 open source projects for "gnu science"
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ATOMKI Common Data Acquisition
Nuclear physics data acquisition system
Nuclear physics data acquisition system. The suit of applications can be used to collect data from physics experiments using CAMAC/CAEN/VME devices. The system is quite specialized, but the code can still be useful for others doing something similar... -
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mfsizes
Multi-FASTA sequence (DNA or protein) statistics calculator.
A simple command-line utility to calculate biological sequence (DNA or protein) sizes in a (multi) FASTA file. It gives averages, GC (or methionine) content, N50, N90, N95, number of N's, and total bases, and can also report by codon if requested. -
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Blob2d
An educational software for drawing graphs.
Blob2d is a software which can be used for drawing graphs. We'll be launching a new release of our software very soon. Right now we don't have the latest version uploaded. You can still download the older versions on the files section. -
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Ctrax is a machine vision program for estimating the positions and orientations of many walking fruit flies, maintaining their individual identities over long periods of time with minimal supervision, and on average for 1.5 fly-hours automatically.
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Tools for FPGA development and IP cores. This project provides tools, cores and documentation to develope FPGA applications. The project focuses on VHDL.
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Application to optimize DNA sequences coding protein to put in in the different organizm (f.e. human protein in E.Coli). It proposes the optimal cutting places to connect many shorter fragments into bigger one using ligaze.
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MultiJava adds open classes and multiple dispatch to Java. Open classes let one add new operations to existing objects. Multiple dispatch has many uses; one typical example is to write event handlers for Swing applications while avoiding nested ifs.
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Iphigenie
A fast and versatile molecular dynamics program
The molecular mechanics (MM) program Iphigenie provides a broad range of molecular dynamics (MD) methods and technologies, including polarizable force fields (PMM), the HADES reaction field, and QM/(P)MM hybrid simulations. -
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VIA attention Up
Videojuego para aumentar los niveles de atención
VIA es un juego con técnicas de Interfaz Cerebro Computador y de Neurofeedback, donde cualquier persona puede entrenar y mejorar sus niveles de atención después de repetidas sesiones. De esta manera será una herramienta útil para apoyar la labor de los psicólogos. El objetivo del juego se basa en un jugador que debe concentrarse lo suficiente para poder ganar una carrera de carros. El primer nivel del juego es de entrenamiento, en el cual aparecerán unas gasolinas de color azul por un... -
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This project aims to develop and share fast frequent subgraph mining and graph learning algorithms. Currently we release the frequent subgraph mining package FFSM and later we will include new functions for graph regression and classification package
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Napoleon Brandy Basic V Interpreter
A development of David Daniels Brandy Basic
Napoleon Brandy is development of David Daniels Brandy basic, an interpreter for BBC Basic (or Basic V), This project can not claim ANSI C compliance as Brandy Basic did, but supports Graphics for the platforms implemented. OS currently supported are Win32 and DOS. Currently a preview release as it is functionally incomplete. -
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rDock
A Fast, OpenSource Program for Docking Ligands to Proteins and N.Acids
rDock is a fast and versatile Open Source docking program that can be used to dock small molecules against proteins and nucleic acids. It is designed for High Throughput Virtual Screening (HTVS) campaigns and Binding Mode prediction studies. rDock is mainly written in C++ and accessory scripts and programs are written in C++, perl or python languages. The full rDock software package requires less than 50 MB of hard disk space and it is compilable in all Linux computers. Thanks to its... -
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KMC-KaiC
Kinetic Monte Carlo simulation of the in-vitro Kai Circadian clock
This code is a dedicated Kinetic Monte Carlo (KMC) algorithm which simulates a model of the post-translational Kai circadian clock. The code allows you to simulate the Kai system at the level of individual KaiC hexamers and monomers and explicitly tracks the turnover of every ATP nucleotide. Apart from ATP hydrolysis, all reactions obey detailed balance. The application of the code is described in our article titled "A Thermodynamically consistent model of the post-translational Kai... -
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OptFrame is a framework for efficient implementation of metaheuristics and optimization methods. It has already been used in some real combinatorial problems and applied to Operations Research. Since November 2017, project has been moved to GitHub (new releases will also be included here in SourceForge, but Git mainline is no longer supported here). For more information, visit: https://github.com/OptFrame/optframe
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Collaborative Computing Project for NMR
Collaborative Computing Project for NMR (CCPN)
The Collaborative Computational Project for NMR (CCPN) provides tools and knowledge to maximise the impact of the biological NMR studies. The CCPN software facilitates data analysis and software integration. The project actively promotes the exchange of knowledge and provides training and best practices for the NMR community. CCPN also has a leading role in the development of a NMR data-sharing standard and coordination of NMR instrumentation proposals for RCUK and BIS. The 28 partners of... -
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Specify Software
Biodiversity Database Platform
Specify is a biological collections and species occurrence database management platform for zoological museums, herbaria and other biodiversity specimen repositories. Specify is supported by grants from the Division of Biological Infrastructure, U.S. National Science Foundation and the State of Kansas. A web browser application, Specify 7, is available on GitHub. In 2015, 450 biological collections worldwide use Specify Software for collections data management. An iPad app, Specify Insight... -
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CRUSH
Data reduction and imaging for select astronomical cameras
CRUSH is a pioneering reduction and imaging suite for many astronomical cameras operating at far-infrared, submillimeter and millimeter wavelengths, such as SHARC-2, SCUBA-2, LABOCA, GISMO, or SOFIA/HAWC+ (to name a few). -
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FractalNow
Fast, advanced, multi-platform fractal generator
FractalNow provides users with tools to generate pictures of various types of fractals quickly and easily. It is made of both a command line tool, FractalNow, and a graphical tool, QFractalNow. The graphical tool, based on Qt library, allows users to explore fractals intuitively and generate pictures. Both tools are entirely multi-threaded and implement advanced algorithms and heuristics that make computation very fast compared to most existing free fractal generators. -
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NanoSystem Class
Class collection to develop new technologies (nano-t)
NanoSystem Class is a class collection to develop new technologies (e.g. new heat exchangers). This handbook contain the method descriptions to use Knf-Model class (to compute nano uid thermal conductivity), VnfModel class (to compute nanouid viscosity) and NnfModel class (to compute nano uid Nus-selt number). NanoSystem class is free software. MD5-code: AF76BF339EDA744EA023957604E919EF -
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gogadget
A toolbox for interpretation and visualization of RNA-seq GO analysis
gogadget is an R package, and can help with the visualization and interpretation of GO enrichment analysis of RNA-seq data. It is developed especially for the use in combination with goseq. The functions that are available in this package are extensively described in the user's guide. To install the package download the "gogadget_2.1.tar.gz" file, open R and install with the following line: install.packages( "C:/your/directory/gogadget_2.1.tar.gz", repos = NULL,... -
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Astrolabe Generator
Generates custom astrolabe EPS files
NOTE: The Astrolabe Generator has moved: The Astrolabe Generator and related projects have moved to a new location. Find us on Github at: https://github.com/wymarc This program will generate a set of PostScript (EPS) files for the front, back, rete and rules of an astrolabe for a given latitude. Additional related quadrant tools are also available. Version 3.0 moves the code to Java. Program is now an executable Jar file. -
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QSS Solver
Modeling and simulation tool for continuous and hybrid systems.
UPDATE: ----------- This repository is no longer maintained, the new version of the QSS Solver is available at: https://github.com/CIFASIS/qss-solver -
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Jamberoo (former JMolEditor) is a library of algorithms for structural Computational Chemistry implemented in the Java programming language. The Jamberoo classes can be integrated into other Java applications.
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Uart32
Win32 API wrappers for accessing COM Uart in blocking mode
Uart32 is a C++ wrapper around the win32 Serial Port API that allows blocking-mode access to the COM port. This library works great for accessing a UART serial port from a background worker thread. It features: a simple c++ class. (temporarily removed for maintainance. Use DLL API Instead) built in per access timeout on data receive. a C-API wrapper that is exportable to C# DLL import class
