Search Results for "algorithm" - Page 50
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Showing 2782 open source projects for "algorithm"
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AS-peak
ASPeak: an abundance sensitive peak detection algorithm for RIP-Seq
Unlike DNA, RNA abundances can vary over several orders of magnitude. Thus identification of RNA-protein binding sites from high throughput sequencing data presents unique challenges. While peak identification in CHIP-Seq data has been extensively explored, there are few bioinformatics tools tailored to peak calling on the analogous datasets for RNA-binding proteins. Here we describe ASPeak, an implementation of an algorithm that we previously applied to detect peaks in Exon Junction Complex... -
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Brute-Force Sudoku Solver
Java, Brute Force, Recursive Sudoku Solver
This program prompts the user for a text file containing puzzle data, attempts to solve the puzzle using a brute force algorithm, and prints the solution along with the time it took to solve. I've included 3 sample puzzle files in the "res" folder. "Sub-box width/height" refers to the dimensions of the inner boxes in the puzzle. For example, a 9x9 puzzle has 9 3x3 sub-boxes. The 6x6 puzzle that I've included has sub-box dimensions of 3x2. This version does not contain any GUI components, so... -
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kmul
Constant multiplication routine generator
kmul is a generator of routines for optimized multiplication by an integer constant. In order to calculate a constant integer multiplication, it uses the public domain routines presented in the work: Preston Briggs and Tim Harvey, "Multiplication by integer constants," Technical report, Rice University, July 1994. This technical report implements Bernstein's algorithm documented in: R. Bernstein, "Multiplication by integer constants," Software - Practice and Experience, Vol. 16... -
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Algorithm::ZeroSum
A Perl module to implement Zero-Sum codes
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TSPLib.Net
TSPLib wrapper for .Net
TSPLib is a set of Traveler Salesman and related graph problems gathered by the Heidelberg university. This project provides .Net library wrapping up library files loading code, implements distance functions and all the TSPLib features. If you'd like to test your graph tour searching algorithm on a TSP lib will save you hours of reading in a data and adjusting your code to ensure that result are comparable. Delivering as a dll with .Net wrapper and a zip archive with all the original... -
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Algebraic Numbers
Visualization of the first few algebraic numbers
This is inspired by http://en.wikipedia.org/wiki/File:Algebraicszoom.png with some source code (especially the polynomial generating algorithm!) taken from http://en.wikipedia.org/wiki/User:Stephen_J._Brooks/algebraics/src -
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MIT SPHERES Simulation (Release)
MIT's spacecraft simulator for control algorithm development
The SPHERES simulation is designed to support most software-related aspects of single- and multi-satellite SPHERES operations. The simulation code base consists of simulated versions of most of the SPHERES core flight code and additional code that simulates dynamics, communications, and other environmental interaction. The simulation is particularly valuable during the early stages of algorithm development and implementation as an aid in accelerating the learning curve for any Guest... -
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PageRank for wikipedia
PageRank algorithm for wikipedia pages on Amazon Elastic MapReduce
• Implemented the project using PageRank algorithm for Wikipedia pages on Amazon Elastic MapReduce. • Designed MapReduce jobs for red links removal, outlink adjacency graph, compute the total number of pages, PageRank calculation, sorting of PageRanks. • To run the project on amazon Elastic MapReduce specify jar location. Pass the directory locations as an argument of input and output respectively. -
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PanGP
PanGP is a tool for quickly analyzing bacterial pan-genome profile.
PanGP is a tool for quickly analyzing bacterial pan-genome profile. It has integrated two kinds of sample algorithm, so that it could calculate the pan-genome profile of a population with dozens of or hundreds of strains at extremely low time-cost. At the same time, a user-friendly graphical interface was designed and the image about pan-genome profile could be drawn by PanGP directly. -
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niGA
Heterogenous Multiprocessor Scheduling Using Genetic Algorithms
Implementation of task scheduling using Genetics algorithm for heterogeneous parallel programming -
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Classical Apriori and Reverse Algorithm
Apriori Algorithm and its Reverse Approach with Comparison
Apriori Algorithm and its Reverse Approach with Comparative Analysis in terms of Execution Time Apriori Algorithm is used in Data Mining for Association Rule Mining -
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SilentEye is a cross-platform application design for an easy use of steganography. It provides a pretty nice interface and an easy integration of new steganography algorithm and cryptography process.
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PythonStatsLab
A collection of useful statistical functions written in Python
... (Riemann sum, Simpson's method, Taylor expansion, etc.) that can be employed in this task, which I hope to add soon. Projected Future Improvements: -Estimation with 2 means -Student's t-distribution -Hart's algorithm for integrating CDF -
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LoveCalculator
A Love Calculator with a Rich User Interface
This is a Love Calculator with a rich user interface and animations made by using JavaFX. This application runs on Windows, Linux and Mac. Java 7 or later is required. Unlike the other Love Calculators found on Internet, this one does not generate random numbers. It uses a popular hand worked algorithm used by most of the school students. The Love Percentage is calculated by the process of listing the frequencies of each letter in the string "<Name1> LOVES <Name2>" and then adding... -
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fingerprint recognition
pattern recognition
Fingerprint recognition algorithm demo, binarization part is done, minutiae match part is still under development. There is binarization result dump for reference. The binarization result is at the same level with some exceptional commercial software. For detail, you can check the blog here. If you're interested in this topic and willing to be involved, you can send me email (samuel.s.chan.2008#gmail.com, replace # by @) . Thanks. -
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An easy-to-use simulator for decentralized distributed scheduling in Clusters, Grids, and Cloud ecosystem MaGate 2.0 is now available from github! https://github.com/huangye177/magate
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Sudoku MEA Solver is projet of desktop Sudoku automatic solver aplication written in C++ with using Qt4. It's based on my batchelor thesis project (Multiagent Evolutionar Algorithm for Sudoku).
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Fileprivacy
Fileprivacy easily encrypts your files
... change the algorithm after setting the keylength. It has to be restarted for further use. Because there are no start scripts, yet, you have to start Fileprivacy from console by typing: java -jar Fileprivacy-1.0_<version>.jar ####### ALSO NOTE ####### The author of this software is not responsible for the safety of your data. There is no guarantee that one or more of the implemented algorithms cannot be compromised. -
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IPeak is a peptide identification pipeline that is designed to combine a post-processing algorithm and multi-search strategy to enhance the sensitivity of peptide identifications without compromising accuracy. Currently, it can combine results from OMSSA, X!Tandem and MS-GF+. It can be used either in command line mode or in GUI (visualized) mode. The software package, source code, some example files and a user's manual file can be downloaded from here https://code.google.com/p/mzidentml-lib...
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Duplicate Files Finder is a cross-platform application for finding and removing duplicate files by deleting, creating hardlinks or creating symbolic links. A special algorithm minimizes the amount of data read from disk, so the program is very fast.
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astronx
simulation of objects in space with classical mechanics
astronx simulates the motion of mass-centres in cartesian space. The mass-centres interact solely through gravity. astronx uses the Bulirsch-Stoer extrapolation algorithm with adaptive stepsize to integrate the newtonian equations of motion. -
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JCryptor
JCryptor is an encrypting tool based on the Caesar-cipher.
JCryptor uses the Caesar-cipher to encrypt keystrokes on-the-fly. It can also be used to decrypt an encrypted text easily. Caesar-cipher is a simple encryption algorithm, developed by Julius Caesar, to encrypt his correspondence with Cicero in the ancient world. Therefore it uses a simple character substitution method to replace a given character by another. A keyshift of thirteen is called ROT13. ROT13 can be decrypted by encrypting it again with ROT13. Even today this simple method is used... -
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HAWK - PDF Text Search Java Project
No more support for this project - TAKE A LOOK AT FALCONSEARCH
No more support for this project - TAKE A LOOK AT FALCONSEARCH "https://sourceforge.net/projects/falcontextsearch/" -
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QPass is easy to use, open source password manager application with built-in password generator. You can store in it's database such data as passwords and logins which will be encrypted using AES-256 with PBKDF2(number of iterations set by user). Each entry can include additional information about entry such as name, url adress and description.
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DeconvDemo
An image deconvolution / deblur software
DeconvDemo is a Qt & opencv based image deconvolution/ deblur software which is including the spatial and frequency domain solver. image deconvolution / deblur software with non-blind deconvolution algorithm New: Add pregressive non-blined deconvolution Add blind kernel estimation Implemented mehtod: METHOD_WIENER, METHOD_TIKHONOV, METHOD_LUCY_RICHARDSON, METHOD_CONJUGATE_GRADIENT, METHOD_SPARSE_PRIOR, METHOD_GAUSSIAN_PRIOR...
