Search Results for "genetic algorithm engine" - Page 5
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Showing 331 open source projects for "genetic algorithm engine"
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JAS is a java library for creating agent based simulations. It features a discrete-event time engine, APIs for network simulation design, powerful yet easy-to-use implementations of Genetic Algorithms and Neural Networks.
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FamSeq
Variant calling on the basis of pedigree information
...FamSeq accommodates de novo mutations and can perform variant calling at chromosome X. To accommodate variations in data complexity, FamSeq consists of three distinct implementations of the Mendelian genetic model: the Bayesian network algorithm, Elston-Stewart algorithm and Markov chain Monte Carlo algorithm. To make the software efficient and applicable to large families, we parallelized the Bayesian network algorithm that copes with pedigrees with inbreeding loops without losing calculation precision on an NVIDIA® graphics processing unit. -
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GenoCAD is a CAD software for synthetic biology. This application provides a web-based tool to design plasmids, artificial gene networks, and other synthetic genetic systems composed of standard genetic parts. It includes a parts management system, a rule-based design tool, and a simulation engine. This project has morphed into a SaaS model. The open source code is no longer maintained.
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SimpleFB_GA
a simple genetic algorithm written in FreeBasic
a FreeBasic-written Genetic Algorithm code is here deployed -
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HfT GA RCPSP
Genetic Algorithm for the RCPSP
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NEAT Visualizer SFML
A NEAT Implementation and Visualization System
Evolves neural networks using the Neuro-Evolution of Augmenting Topologies (NEAT) technique. A separate visualization system uses another genetic algorithm to evolve images of the otherwise dimensionless networks so their structure can be observed. -
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FastPeak
Fast AFM force curve peaks detector algorithm
Algorithm is so simple, that you can implement it in any language in few hours, without any specialized libraries. To be implemented in our Nanopuller AFM control software as real-time module. Requires LabVIEW Runtime engine to run .exe or LabVIEW 2013 for code. -
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fusie
Fuzzy scala inference engine
Rewriting from Java to Scala and improving my university project on course Artifical Intelligence Systems. About project in russian: http://brunneng.blogspot.com/2013/06/fuzzy-scala-inference-engine-fusie.html Can be used from maven: <dependency> <groupId>net.sf.brunneng.fusie</groupId> <artifactId>fusie</artifactId> <version>0.8.1</version> </dependency> -
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VariantMaster
Extract causative variants for monogenic and sporadic genetic diseases
...To improve the identification of the variants from HTS, we developed VariantMaster, an original program that accurately and efficiently extracts causative variants in familial and sporadic genetic diseases. The algorithm takes into account predicted variants (SNPs and indels) in affected individuals or tumor samples and utilizes the row (BAM) data to robustly estimate the conditional probability of segregation in a family, as well as the probability of it being de novo or somatic. In familial cases, various modes of inheritance are considered: X-linked, autosomal dominant, and recessive (homozygosity or compound heterozygosity). ... -
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SEO & SEM - Marketing Text Writer
Open Source SEO & SEM Text Creation Tools for free Article Writer
Open Source Tool for Search Engine Optimization (SEO & SEM) used for automatic content processing. These SEO Content Genrators and Article Writers based on Text... -
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niGA
Heterogenous Multiprocessor Scheduling Using Genetic Algorithms
Implementation of task scheduling using Genetics algorithm for heterogeneous parallel programming -
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Bin Packing with Genectic Algorithm
Bin Packing problem solved using Genectic Algorithm
This project contains a solution for a Bin Packing problem solved using Genectic Algorithms. The code in the project was created as a solution for a problem in a combinatorial optimization class at the Univeridade Federal do Rio Grande do Sul (UFRGS - Brasil) in 2007. -
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OBSOLETE s-ga
genetic algorithm
Obsolete. Moved to the new Project 'sgena' -
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Evochumps
Evolving recursive artificial neural networks in a simulation.
...It has a built-in evolutionary algorith to let the brains evolve conditoned to selective pressure. The program's interface allows you to manipulate all kinds of parameters of both the simulation, the genetic algorithm, and each particular RNN in real time. -
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PyGAO
Genetic Algorithm Optimization for Python
A simple interface for performing genetic algorithm optimization for numerical problems. I am starting with a stripped-down version, where a solution can be described using a single vector of float numbers. Eventually, I will expand to more generic data structures and add multiple-species search options. For the time being, I have no plans of developing a GUI. For now, this is strictly a computational module. -
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ABM-Calibration-SensitivityAnalysis
Codes and Data for Calibration and Sensitivity Analysis of ABM
...<http://jasss.soc.surrey.ac.uk/xx/x/x.html> Methods/Techniques used are: a. Parameter fitting: 1. Full Factorial Design 2. Simple Random Sampling 3. Latin Hypercube Sampling 4. Quasi-Newton Method 5. Simulated Annealing 6. Genetic Algorithm 7. Approximate Bayesian Computation b. Sensitivity Analysis: 1. Local SA 2. Morris Screening 3. DoE 4. Partial (Rank) Correlation Coefficient 5. Standardised (Rank) Regression Coefficient 6. Sobol' 7. eFAST 8. FANOVA Decomposition Have also a look on our other projects: http://www.uni-goettingen.de/de/315075.html -
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ALCHEMY is a genotype calling algorithm for Affymetrix and Illumina products which is not based on clustering methods. Features include explicit handling of reduced heterozygosity due to inbreeding and accurate results with small sample sizes
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Model Based Test Generator
Model Based Test Generator from UML
The purpose of this project is creating test cases from uml statemachine and Class diagram with OCL constraint. We use forward search strategy to creating abstract test cases and using genetic algorithm for creating test data. -
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NNBrain
A free, open source collection of neural network based AI agents.
NNBrain is a free and open source collection of artificial intelligence agents. These agents have applications in video games, research, business, and more. The included agents function in both discrete and continuous action and state spaces. -
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Tetris AI
A try to demonstrate an AI module based on doubled genetic algorithm.
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MROrder
MROrder: Automated MapReduce Job Ordering Optimizaton Prototype System
...There are two core components for MROrder, i.e., policy module and ordering module. The policy module decides when and how to perform job ordering dynamcially. The ordering engine, consists of two engines, namely, simulation-based engine and algorithm-based engine. It is responsible for implementing job ordering. Users just need to input some simple arguments. For example, users need to designate the job ordering performance metric( e.g., makespan, total completion time). The MROrder then starts to do job ordering optimization automatically for online MapReduce jobs, based on user's configuration. -
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OpenAIL
Open Artificial Intelligence Library
[Open Artificial Intelligence Library]. This library main goal is to provide a tool box to those who want to use algorithm such as neural network or genetics Algorithm and all algorithms that are commonly within the Artificial Intelligence field. -
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Critterding
Evolving Artificial Life
Critterding is a "Petri dish" universe in 3D that demonstrates evolving artificial life. Critters start out with completely random brains and bodies, but will automatically start evolving into something with much better survival skills. -
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AEvolution
Artificial life game
Artificial life game using a genetic algorithm in a simple 2D world. -
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Reactor Breeder
A Genetic Algorithm for Reactors in StarMade
This software uses a genetic algorithm to "evolve" reactor designs for Schema's space-simulation game, Star-Made (http://star-made.org/). One of the more unique aspects of the game is that ship power management is not as simple as filling a cube with power generation blocks. This mechanism leads to difficulties in getting maximal power generation out of such reactors.
