Search Results for "draft" - Page 5
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Showing 225 open source projects for "draft"
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Scaffold_Builder
Combining de novo and reference-guided assembly with Scaffold_builder
Scaffold_builder is software to order contigs generated by draft sequencing along a reference sequence. Gaps are filled with N's and small overlaps are aligned with Needleman–Wunsch algorithm and the consensus created with IUPAC codes. Scaffold_builder can help in the assembly and annotation of genomes by revealing what is missing and allowing targeted sequencing to close those gaps. (c) Silva GG, Dutilh BE, Matthews TD, Elkins K, Schmieder R, Dinsdale EA, Edwards RA. ... -
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Network of Information
Information Centric Networking using the NetInf paradigm.
This project hosts code and information for various packages implementing or using the Network of Information paradigm. The software provides implementations of the NI naming scheme (draft-farrell-decade-ni) and other NetInf features (such as convergence layers, forwarding, caching) in different languages, including C, Clojure, Java, PHP, Python, and Ruby. It also contains additional tools such as patches to curl and wget and shells scripts for web server support. -
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PHP Draft
Web based fantasy sports draft app
Version 2.0 is here - for source code and releases, please see the new project page on Github, or sign up for your own account at phpdraft.com! Atlassian Bitbucket is awesome and is not the reason for the switch at all (Sourceforge is). For all future development, please follow the project on Github. -Matt -
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ENLY
Bioinformatic tool to improve draft genome assemblies by closing gaps
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PanCoreGen1
A comprehensive tool to profile, detect & annotate microbial genomes.
PanCoreGen is a Windows-based standalone tool offering 4-in-1 functionalities – (i) pan-/core-genomic profiles across the entire sample set; (ii) similar profiles within user-defined strain-groups; (iii) annotations of user-provided draft genomes; and (iv) detection of unidentified genes in annotated genomes. -
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LDWM: Hash-Based Signatures (draft-mcgrew-hash-sigs-02), PHP implementation of IETF pqcrypto algorithm specification
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py3mtp
python3 variant of pymtp
...>>This project is retired,<< pymtp is an excellent library to link python and libmtp to access mtp devices. The version created by Nick Devito (https://pypi.python.org/pypi/PyMTP) works only with python2. Finally created a draft icon (suggestions welcome). -
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SketchTrack
Draw railway tracks in 3D from a simple script language in SketchUp
SketchTrack is a SketchUp plugin intended to serve as computer aided design (CAD) tool for track planning, especially for railway modellers who want to use the same planning paradigms used for real-world track layouts. This usually includes (but is not restricted to) self-made track work. SketchTrack reads a text file containing the track program and draws it in a 3D space. So, instead of clicking together a track layout in a graphical editor, the user of SketchTrack has to provide a... -
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MITRE Common Layer 3
Approach to choose MANET routing peers for existing protocols.
...This software is a prototype of the Common Layer 3 interface for two different mobility patterns on a mobile network using OLSR for MANET routing and OSPFv2 for IP routing. Draft RFC describing this interface in detail may be found at https://datatracker.ietf.org/doc/draft-shaio-manet-common-l3-interface/. -
Axe Credit Portal - ACP- is axefinance’s future-proof AI-driven solution to digitalize the loan process from KYC to servicing, available as a locally hosted or cloud-based software.Founded in 2004, axefinance is a global market-leading software provider focused on credit risk automation for lenders looking to provide an efficient, competitive, and seamless omnichannel financing journey for all client segments (FI, Retail, Commercial, and Corporate.)
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SOAPdenovo2
Large-size genome de-novo assembler
What's next of SOAPdenovo2: MEGAHIT is the formal successor of SOAPdenovo2 MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph http://www.ncbi.nlm.nih.gov/pubmed/25609793 https://github.com/voutcn/megahit Latest Code on GitHub: https://github.com/aquaskyline/SOAPdenovo2 SOAPdenovo is a novel short-read assembly method that can build a de novo draft assembly for human-sized genomes. The program is specially designed to assemble Illumina short reads. It creates new opportunities for building reference sequences and carrying out accurate analyses of unexplored genomes in a cost effective way. SOAPdenovo2 is the successor of SOAPdenovo. Cite the paper published in GigaScience (see website below) if you want to cite SOAPdenovo2. -
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hbgm
'Hierarchical Bond Graph Modelling of Biochemical Networks'
... (3) Department of Mathematics and Statistics, University of Melbourne, Victoria 3010, Australia. (4) School of Medicine, University of Melbourne, Victoria 3010, Australia Draft paper available at http://arxiv.org/abs/1503.01814 -
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Z4 Phreak Tools 2.3
Modify Request and Response Header
...- Fixed bugs Traffic - Fixed bugs Dialer - Fixed bugs Set Proxy IDM - Change Proxy Server (with listview) - Fixed bugs Query (add use query mode only) - Add New User-Agent to Query (SonyEriccson, NOKIA, Opera Mini, and Custom) - SMS (Create, Inbox, Outbox, Draft, Kontak) - Diagnostics Modem (Operator, Speed, RSSI, MCC, MNC, LAC, Cell ID, QoS, Sent, Recieved) - Set Network Type modem (3G Only, 3G Preferred, Edge Only, Edge Preferred) - Move Apps to main menu file (Tools > Apps External) - Move +Header to Header (in Manual mode configuration header) - Fixed bugs Lock GUI - Change main menu MDMA to PING - Fixed bugs GUI Header Log - New Icon for Change icon button - Add Updater - Fixed location tor.exe - Fixed Redial/ Reconnect (with count dial attemps) - Fixed Properties Modem (add number dial, use dns, disable netbios) Regards, Author : zaya razta (z4y4@bugs4u) -
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Save Web Page Inputs
Save user inputs into web a page
...An AppleScript called replaceHtml.scpt calls getNewHtml(), and sets string_to_write to the content of an .html file. The AppleScript then write the string to a TextWrangler file. This is a first rough draft of the JavaScript and AppleScript, but both work now. -
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Hyperic Google map plugin
Display resources with location property in Google map
A Hyperic HQ UI plugin to display the resources with location property in a google map. This is only a draft. Please visit http://www.innovatedigital.com/en/node/1005 or wiki page for more details. -
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busilet
Busilet is a reference implementation of IDTP and UTID.
...The IDTP (Identifier Tracing Protocol) is a communication protocol to access the information of a thing that identified by UTID. The IDTP and UTID were designed by the author of the Busilet project in recent three years. For more information, see: https://datatracker.ietf.org/doc/draft-huangng-idtp/ https://datatracker.ietf.org/doc/draft-huangng-utid/ Project Busilet is a reference implementation of IDTP that provides a set of APIs developers to develop IDTP server and IDTP client software. Busilet4j is written in Java language and is for Java programmer to develop IDTP server and IDTP client software. The documents include IDTP specification v0.95 both in English and Chinese edition, an API specification in English only, all source code in Java, and a set of JUnit tests. ... -
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HOBA - No Passwords at all!
HTTP Origin Bound Authentication (HOBA)
An implementation of http://tools.ietf.org/html/draft-ietf-httpauth-hoba that allows users to do web authentication without any passwords at all. This is for web site admins. Main client is JS. Check it out at https://hoba.ie/ -
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FIAP
Fully Integrated Annotation Pipeline
...This feature is extremely valuable because it allows users to add a personal “flavor” to the annotation and optimize the process for a specific bacterial genome. FIAP can annotate single and multiple sequences, which allows users to annotate, for example, draft genome contigs or different genomes concatenated in multi-fasta file in a single step. FIAP works on all UNIX-like operating systems (tested on Ubuntu 14.04 LTS and Mac OS 10.9.4). -
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AS3WebSocket
ActionScript client implementation for the WebSocket Draft RFC6455
AS3WebSocket is an ActionScript 3 client implementation of the WebSocket protocol, following the final version of RFC 6455. It’s designed to allow Flash/AIR applications to connect via WebSocket (including secure WebSocket: wss://) to servers implementing that standard, to send/receive text and binary data, handle subprotocols, and support fragmentation etc. A test app is included. The testApp directory contains a Flash Builder 4.6 Air Project that uses the AS3WebSocket library and... -
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Daily_log
"Daily_log" is a program which will help you to plan the day.
Project "Daily_log" - is my small draft of the program "Daily_log".The program is written on Python version 3.1 under the Windows platform. The program "Daily log" designed to help you in planning your tasks for the day, week, month. You can add: - Еvents that you can forget; - Schedule of the day; Also there is a note book. There will be updatings of versions, for completion of features and correction of bugs. -
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New version was released! Visit https://github.com/jsnjack/simpleblogger to download Simple Blogger is a small and very easy to use application that enables you to quickly write and publish a new post of your blog. Available in Windows and Linux. Simple Blogger has written on Python with wxPython.
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The AntHill SMPP is a library (C++, Ruby) that implements SMPP protocol (v 3.4 & v 5.0 draft 6). It contains SMPP encoder, decoder and validators. Resources (XSD schema, XMLs, SMPP dumps) and utilities (DumpViewer, PDUComposer and etc) are included.
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VIGOR3
Annotation of Viral Genomes
VIGOR is a tool for annotating coding genes in viral genomes. It was developed by Jeffrey Hoover and Shiliang Wang for The JCVI Genomic Sequencing Center for Infectious Diseases (GSCID). http://www.biomedcentral.com/content/pdf/1471-2105-11-451.pdf contact: Jeff Hoover 301-540-7858 jefhv@aol.com -
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A java m3u8 playlist parser for Http Live Streaming. See ietf draft http://tools.ietf.org/html/draft-pantos-http-live-streaming-02 for details. See See: http://m3u8parser.chilicat.net for JavaDoc and simple Webstart application to test the parser
