Showing 11014 open source projects for "gnu science"

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  • 1
    jDHTUQ
    ATTENTION: For more info and latest version, refer to https://github.com/estigma88/jdhtuq. jDHTUQ is a peer-to-peer DHT system based in Chord algorithm, but built like API to generalize the implementation of peer-to-peer DHT systems. jDHTUQ have two fundamental services , put and get of resource.
    Downloads: 1 This Week
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  • 2
    PF_HP

    PF_HP

    Prediction of proteinfolding in 2D HP model

    Even in the simplified two dimensional HP-model (hydrophob/polar) the prediction of proteinfolding is NP complete. We implement a brute force algorithm with serial and parallel execution to solve short inputs of HP sequences (0-1 bitstrings). Selbst im vereinfachten zweidimensionalen HP-Modell (hydrophob/polar) ist die Proteinfaltung bereits NP-vollständig. Hier implementieren wir einen brute-force Algorithmus zur Lösung kurzer Eingabesequenzen (0-1-Bitstrings) für die...
    Downloads: 0 This Week
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  • 3

    YFitter

    Fitting Y chromosome haplogroups by maximum likelihood

    Yfitter is a program for assigning Y chromosome haplogroups to individuals sequenced at low coverage. It is designed to be used in a samtools/bcftools pipeline. Yfitter also supports haplogrouping using chip genotype data.
    Downloads: 0 This Week
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  • 4
    JointTrack Auto
    Please see https://github.com/BRIO-lab/Joint-Track-Machine-Learning for the latest version of the JointTrack/JointTrack Auto lineage.
    Downloads: 0 This Week
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  • 5
    PiXtend

    PiXtend

    every project needs a solid base

    PiXtend® multiplies the capabilities of the Raspberry Pi and forms the ideal basis for challenging projects. The PiXtend Platform provides numerous digital and analog inputs & outputs as well as a variety of serial interfaces like RS232, RS485 and CAN. In this repository you can find the Linux C library called "pxdev" that can be used to develop your own Linux applications for the PiXtend system (V1 & V2). Sample programs for every PiXtend version are also included in this...
    Downloads: 0 This Week
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  • 6
    Star Control: TimeWarp is a fan created project that intends to create a science fiction war/exploration game based on the Star Control Universe. This project is largely superseded by TW-Light, a more stable version. See https://tw-light.appspot.com/
    Downloads: 1 This Week
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  • 7
    A package for computations with finite automata (rooted tree automorphisms) for the GAP system, http://www.gap-system.org.
    Downloads: 0 This Week
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  • 8

    ADL mining framework

    A set of applications for the mining of Activities of Daily Living

    The recognition of Activities of Daily Living (ADL) has represented one of the most developed research areas in recent years. Its objective is to determine what daily activity is developed by the inhabitants of a smart environment. In this project, an ontology-based framework for the mining of ADL with a generic ontology and a modular architecture is proposed. The framework includes applications to: i) load multiple datasets available in literature, ii) to provide different methods for the...
    Downloads: 0 This Week
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  • 9
    A few python functions to read common metrology formats from different instruments: Zygo, MountainView, Digital Surf, .sur
    Downloads: 0 This Week
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  • 10

    CIF2Cell

    Generating cells for electronic structure calculations from CIF files

    CIF2Cell is a tool to generate the geometrical setup for various electronic structure codes from a CIF (Crystallographic Information Framework) file. The program currently supports output for a number of popular electronic structure programs, including ABINIT, ASE, CASTEP, CP2K, CPMD, CRYSTAL09, Elk, EMTO, Exciting, Fleur, FHI-aims, Hutsepot, MOPAC, Quantum Espresso, RSPt, Siesta, SPR-KKR, VASP. Also exports some related formats like .coo, .cfg and .xyz-files. The program has been published...
    Downloads: 2 This Week
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  • 11
    DebUsSy DFA Suite
    A Suite of Programs implementing a fast approach to the Debye Function Analysis (DFA) of powder diffraction data from nanocrystalline and/or non-ordered materials. See J. Appl. Cryst. 2015, 48, 2026-2032
    Downloads: 2 This Week
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  • 12
    YCTget

    YCTget

    Program to fetch datas from YC-7x7 dataloggers from YCT

    We needed a datalogger, we found one. But the supplied VB6 program was very crappy, _really_ unusable, even on old XP machines. So I did mine, able to run under windows and linux. All the fun was to reverse the (binary) RS232 protocol. Our is a YC-727D with 2 thermocouple inputs, but the protocol is the same for 1, 2, 3 or 4 inputs models (YC-717, YC-727, YC-737, YC-747). Bytes orders needs to be checked for 3th and 4nd channels tough.
    Downloads: 1 This Week
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  • 13
    Lightweight ext4 filesystem library

    Lightweight ext4 filesystem library

    ext2/3/4 library for microcontrollers

    Code is also available on github: https://github.com/gkostka/lwext4 Feel free to contact me: kostka.grzegorz@gmail.com
    Downloads: 0 This Week
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  • 14
    SparesPOP is a MATLAB implementation of a sparse semidefinite programming (SDP) relaxation method proposed for polynomial optimization problems (POPs). Please send a message to kojima-spop@is.titech.ac.jp if you have any question and/or request. We also release SparsePOPC++ and SparsePOPC++-windows. Both implementations are SparsePOP which does not use MATLAB, but only C++. In particular, SparsePOPC++-windows contains a binary file which works on Windows, and does not require to compile.
    Downloads: 1 This Week
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  • 15
    PK2Aux is a library and suite of command-line utilities for using the Microchip PICkit2 programmer device for purposes other than programming (such as the generic pin controls, serial UART, and logic analyzer modes provided by the Windows software).
    Downloads: 0 This Week
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  • 16
    GILIB

    GILIB

    GILIB Large Integer Arithmetic Library

    A large integer arithmetic library written in plain C.
    Downloads: 0 This Week
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  • 17
    jCOLIBRI: an object-oriented framework in Java for building Case-Based Reasoning (CBR) systems. Supports Textual-CBR, Knowledge Intensive CBR with Description Logics reasoning through Ontologies, Web interfaces, evaluation of the generated applications,
    Downloads: 3 This Week
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  • 18
    JLibModbus - Java Modbus Library

    JLibModbus - Java Modbus Library

    A modbus library implemented in Java.

    JLibModbus is an implementation of the Modbus protocol v1.1b in java language. The library supports the most popular communication libraries (jssc, rxtx, jSerialComm, purejavacomm, java comm api); Maven dependency: <dependency> <groupId>com.intelligt.modbus</groupId> <artifactId>jlibmodbus</artifactId> <version>1.2.9.7</version> </dependency> Implemented MODBUS functions: 0x01 Read Coils 0x02 Read Discrete Inputs 0x03 Read Holding Registers 0x04 Read Input...
    Downloads: 4 This Week
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  • 19

    OpenGrowth

    OpenGrowth is a program which constructs de novo ligands for proteins.

    OpenGrowth is a research program which grows new ligands in proteins by connecting small organic fragments. The details can be found in the original publication "OpenGrowth: an automated and rational algorithm for finding new protein ligands" (J. Med. Chem., http://dx.doi.org/10.1021/acs.jmedchem.5b00886). To use OpenGrowth, you will need OpenGrowth_1.0.zip and Resources_1.0.2.zip that can be found by clicking on the Files menu in the horizontal bar at the top...
    Downloads: 6 This Week
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  • 20

    TIM

    A raytracer for forbidden optics

    *** TIM's (now Dr TIM's) source code has moved to https://github.com/jkcuk/Dr-TIM *** TIM is a raytracer that was originally developed to simulate optical components called METATOYs, but it has since then developed into something much more general. Amongst other things, TIM can also calculate random-dot stereograms and anaglyphs and visualise ray trajectories.
    Downloads: 0 This Week
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  • 21
    MGF 2 FOR-JSON

    MGF 2 FOR-JSON

    Conversion of MGF files to JSON format

    Want to convert an MGF file to JSON format? This is the app for you, especially if you want to use the JSON file in the FOR-IDENT search program. If you don't know what MGF file, JSON format, FOR-IDENT search program is then this isn't the app for you. Happy conversion!
    Downloads: 0 This Week
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  • 22
    An R package for metrology. metRology provides classes and calculation and plotting functions for metrology applications, including measurement uncertainty estimation and (eventually) inter-laboratory metrology comparison studies.
    Downloads: 0 This Week
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  • 23
    DICOM Image Reader

    DICOM Image Reader

    A minimal Medical application to read and view DICOM (dcm) image file

    Dicom Image Reader is opensource medical image viewer built with JavaScript, HTML5, NodeJS and Electron framework. It can load data in DICOM format (single image dcm) and provides standard tools for its manipulation such as contrast, zoom, drag, possibility to draw regions on top of the image and imaging filters such as threshold and sharpening. It is based DWV JavaScript opensource library. =============== Requirements: - Processor: Intel Pentium 4 processor or later that's SSE2...
    Downloads: 12 This Week
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  • 24
    GPU,  a Global Processing Unit

    GPU, a Global Processing Unit

    A framework for distributed computing

    An extensible framework for distributed computing on P2P grids. We support peaceful free and open research and build an internet supercomputer. We render movies, solve Eternity puzzles, predict climate and improve a ~30 GHz cluster of clients.
    Downloads: 7 This Week
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  • 25

    octave-intinf

    Infinite-precision integer arithmetic for Octave, written in Octave

    Octave code to perform arbitrary-precision integer arithmetic. It may or may not work in Matlab. The supported operations are: >> s = a = intinf (126) % Creation of intinf-class object from integer or string >> b = intinf ('-792716404922304611755050042308687') >> c = a + b % Addition >> d = a - b % Subtraction >> e = c * d % Multiplication >> f = (e - a^2) / b %...
    Downloads: 0 This Week
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