Search Results for "shell script" - Page 4
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Showing 1242 open source projects for "shell script"
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1
somatic.sh
script for somatic SNP and Indel calling
somatic.sh is a shell script to run varscan somatic for somatic variant-calling, and Annovar to annotate. It calls both SNPs and Indels. It also produces 2 MAF files compatible with MutSigCV. Now the script allows for multithreading. The script is updated according to new format. -
2
windows-bootable-usb-creator for Linux
Script to create bootable Windows Setup USB drives
...This script allows you to create a bootable Windows Setup USB drive based on a Windows installation ISO, even if the ISO contains an "install.wim" file larger than 4 GB (something which is not possible on FAT32). This is a POSIX-compatible Unix shell script and is intended to be used on a Linux system. -
3
ffhevc
Small script to encode to H.265/HEVC video
ffhevc is a TUI (Terminal User Interface) Bash shell program script written for the GNU/Linux and BSD operating systems for encoding video files to the H.265/HEVC video format using FFmpeg and the libx265 library. Targeted primarily at encoding of full-length feature films and film series but it can be used for other content as well. -
4
HardenLinux
Shell Script to Harden Default Values in Linux Distributions
HardenLinux is a shell script designed to harden default values in Linux distributions and assist with malware removal. With root permissions, it can perform many tasks listed in a menu. As a script, HardenLinux is highly documented and easy to comprehend. -
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ffx264
Small script to encode to H.264/AVC video
ffx264 is a TUI (Terminal User Interface) Bash shell program script written for the GNU/Linux and BSD operating systems for encoding video files to the H.264/AVC video format using FFmpeg and the libx264 library. Targeted primarily at encoding of full-length feature films and film series but it can be used for other content as well. -
6
This is a simple bash shell script that creates and restores an encrypted backup using GPG in splitted files of 2GB.
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7
mkconfig
build configuration tool
mkconfig is a build configuration utility. It creates an output file intended to be included as a header file, run as a shell script, used as a configuration file, or any other use. mkconfig is written in portable shell script and designed to be extensible for any configuration use. -
8
nwg-iso
Arch Linux ISO with nwg-shell for sway and Hyprland
The nwg-iso project provides an ISO image built with archiso, with additions to ensure a simple way to install Arch Linux, sway & Hyprland Wayland compositors and the nwg-shell toolbox. The live environment comes with Hyprland and sway session, so that you can test compositors and the shell before installation. It also contains the 'installer' command, which is a simplified version of the interactive installation with the archinstall script. Some must have stuff has already been pre-selected. User name and password: 'nwg'. ... -
9
AllClipboardsToOne
This small program allows to merge all the entries of the clipboard.
This small program, python script allows merging all the entries of the clipboard (clipboard) into one. It only works with Gnome shell and the Clipboard indicator extension. -
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10
kube-ps1
Kubernetes prompt info for bash and zsh
...Red was chosen as the context name to stand out, and cyan for the namespace. 256 colors are available by specifying the numerical value as the variable argument. Due to the vast ways of customizing the shell, please try the prompt with a minimal configuration before submitting a bug report. -
11
ffxvid
Small script to encode to Xvid video
ffxvid is a TUI (Terminal User Interface) Bash shell program script written for the GNU/Linux and BSD operating systems for encoding video files to the MPEG4 Part 2/Xvid video format using the FFmpeg encoder and the libxvid library. Targeted primarily at encoding of full-length feature films and film series but it can be used for other content as well. -
12
Crosser
dll stack builder
Modern versions (since 0.9) of crosser contain script to cross-compile number of Windows dlls on Linux host, and dll stacks built with it. Ancient versions (up to 0.8): Crosser has two main shell scripts that are combined under same project simply because they share so much other files - having three projects, one for common stuff and one for each main script, would be overkill. -
13
Magnetic tape partitioning tool
command line tool to partition LTO-5+ tapes
This little shell script can create partitions on an LTO-5+ tape. LTO-5 tapes can hold 2 partitions, LTO-6+ tapes can hold up to 4 partitions. It can work as batch and interactive (menu driven) on console/terminal. -
14
LogScan
Logfile summarization
Logscan summarizes you logfiles in a quick, effective, flexible and standardised way. It runs your logs through awk, which uses an AWK-script per service. It is architecture independent, designed for use in crontab. You can even create custom scripts. -
15
SQL*Plus Commander
Text-based user interface to query data on Oracle DB in a smart way
SQL*Plus Commander is Text-based user interface (TUI) / framework to query data on Oracle DB in a smart way. It consists in a fully customizable script shell for bash and ksh. It executes custom queries or procedures on DB with SQLPlus for Oracle. The results of queries can be browsed in a colorful text interface resulting data from a query can be selected and passed dinamically as parameters for others queries or procedures It may be useful for people who runs frequently a limited number of query and uses the results as parameters for other queries. ... -
16
SetBingWP
Sets bing's picture of the day as wallpaper for your desktop.
setBingWP.sh is a bash shell script that's meant to be run when you login to your Linux, Windows or Mac desktop. It checks your internet connection, downloads the image of the day from bing.com, optionally includes the image's description into the picture and sets it as wallpaper for your desktop environment. Like this you have a different, beautiful desktop background every day. -
17
This is a Bourne shell script wrapper surrounding a pure postscript level 3 program to graphically display disk space usage output from the du program. Portability is key.
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18
ZFS Snapshot Extractor
Bash script to extract a specific file from ZFS snapshots
This is a simple Bash script to extract a specific version of a given file from ZFS snapshots. It must be started in the directory where the ZFS dataset is mounted. The relative path for the file must be given as parameter. It then displays a list of all files with a unique modification time time from the snapshots under .zfs/scnapshot and allows to select one (or several) to be copied to the user's home directory. Example: cd /tank/mydata zfs-snapshot-extract.sh documents/report.txt -
19
microenc
Batch audio encoding script for Linux/BSD
microenc is a small Bash shell script for Linux/BSD for encoding directories with audio files to other formats using FFmpeg as encoder. -
20
rna-test
script for variant calling of RNA-Seq
rna_test.sh is a shell script to run GATK best practice for variant-calling in RNAseq. It uses STAR2.5 for alignment, HaplotypeCaller to call variants, and Annovar to annotate. It also employs STAR-Fusion, Cufflinks and Stringtie FPKM, HTSeq_count and BAM-readcount. Notice: STAR_gene_read and HTSeq_count are added. exac03nontcga is added. STAR-Fusion is added. -
21
FWiptables. Firewall With iptables.
iptables mini-script in file-wizard
The fwiptables is a one-file WIZARD, for IPTABLES with COMMAND-LINE, with CLI-MENU, with GUI-MENU, with GUI-ROLL, with GUI-SHELL. fwiptables develop with Purpose Educational Since 2020, developing code Since 2024, cleaning code Since 2025, fixing code Browse Wiki: https://sourceforge.net/p/f-iptables/wiki/browse_pages/ Anonymouse Ticket: https://sourceforge.net/p/f-iptables/tickets/ -
22
VPN Connection Sharing
Share a VPN connection with VMs or containers
Easily share a VPN connection with your virtual machines or containers with this script. Works with IPsec VPN connections (like strongSwan), and lets your VMs reuse the VPN connection of your host system. Create a desktop launcher to start the VPN connection sharing script whenever you need it. -
23
LsCsScintilla
Port of Scintilla to Ls-Cs
Now that Qt is basically no longer OpenSource given there is no LTS and the "community" is barred from choosing direction or maintaining its own LTS, a port of Scintilla was needed. Ls-Cs is a port of CopperSpice which is a port of the last real OpenSource version of Qt, version 4.8. LsCsScintilla is a port of Scintilla to work with Ls-Cs. All Qt+Scintilla based editors should be able to port to Ls-Cs+LsCsScintilla rather painlessly. RedDiamond uses Ls-Cs+LsCsScintilla Previous... -
24
Extreme Ultimate .bashrc
Extreme ultimate .bashrc configuration file for Bash
Do you want a more robust experience from your bash shell? As a Linux systems administrator, I've been working on this .bashrc file for well over a decade. Over the years, I have searched through scores of others' .bashrc and script files collecting and improving on new ideas and features. This portable drop in bash configuration file can be used on any system anywhere you use a terminal. -
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sysmon
Sysmon prints short and uniform information about OS
This shell script prints short and uniform information about OS such as: CPU, RAM, OS name and version, kernel version, hostname, system load, current processes, network interfaces, total logged in users, hard disks, runlevel, etc. No root or any special superuser's rights are required. Runs under Linux, Android (Termux), Windows (Msys2 and Cygwin), FreeBSD, NetBSD, DragonFly BSD, OpenBSD and other Unix-like systems.
