Search Results for "genetic algorithm engine" - Page 4
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Showing 331 open source projects for "genetic algorithm engine"
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GLORIA
a reasoning engine for agents and games
This project is about implementing a logic-programming based, reasoning engine for an agent. We started with an implementation of the iff-proof procedures, by Kowalski and Fung, as an any-time algorithm written in Prolog. -
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Genetic Evolution Project
Evolution with Genetic algorithms
This project is meant to simulate Evolution using genetic algorithms and unity engine. -
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GA-EoC
GeneticAlgorithm-based search for Heterogeneous Ensemble Combinations
...To enhance classification performances, we propose an ensemble of classifiers that combine the classification outputs of base classifiers using the simplest and largely used majority voting approach. Instead of creating the ensemble using all base classifiers, we have implemented a genetic algorithm (GA) to search for the best combination from heterogeneous base classifiers. The classification performances achieved by the proposed method method on the chosen datasets are promising. -
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REDHORSE
Software suite for the analysis of haploid hybrids using NGS
...We therefore designed a software suite called REDHORSE that takes genomic alignments as input, extracts meaningful markers and generates MSAs that are the inputs to existing RD algorithms. In addition, REDHORSE implements a custom RD algorithm that makes use of sequence information and genomic positions to accurately detect crossovers. REDHORSE is portable and platform independent suite that provides efficient analysis of genetic crosses based on NGS data. -
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This software searches the potential energy surface of small to medium size atomic systems for global minima using quantum ab initio techniques. It performs bond rotations and molecule translations and rotations on a Linux cluster with MPI.
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New Terrain and 3D Map System
a very lightweight advanced terrain-rendering and 3D map rendering sys
A very lightweight advanced terrain-rendering and 3D map rendering system. Minimal dependencies: OpenGL, SDL. It's distrib in 2-3 separate modules: 1. the C++ implementation of the terrain- and/or surface- rendering Algorithms I have developed: both a multithread and a non-multithread variant is relaeased. 2. Seme as at point 1. , but with a road-network rendering and collision-detection module I wrote before. It also adds some trees at the top of the terrain. (multitread vesion not... -
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GeneticAlgorithms
Framework for using the Genetic Algorithms optimization heuristic.
GeneticAlgorithms is a simple and lightweight framework to implement an optimization heuristic following the Genetic Algorithms model. A genetic algorithm mimics the natural processes of evolution, selection and "survival of the fittest". This framework is intuitive and good integrated with Java 1.5 SDK and later. -
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BiRW
Bi-random Walks for Phenome-Genome Association Prediction
The availability of ontologies and systematic documentations of phenotypes and their genetic associations has enabled large-scale network-based global analyses of the association between the complete collection of phenotypes (phenome) and genes. BiRW is a package designed for analysis and prediction of the phenome-genome associations. BiRW package contains a program for analysis of circular bigraphs (CBGs) and the bi-random walk (BiRW) algorithm to capture the CBG patterns in the networks for unveiling human and mouse phenome-genome association. ... -
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MassWiz
Proteomics MS/MS database search engine
Open Source MS/MS algorithm with integrated target-decoy based FDR. Reference- http://pubs.acs.org/doi/abs/10.1021/pr200031z , Check out the wiki site for help and support - https://sourceforge.net/apps/mediawiki/masswiz/index.php?title=Main_Page -
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TicTacToe
Tic Tac Toe game with clever computer player
...The AI has two settings: dumb and intelligent. The dump setting places tokens by random, the intelligent setting plays the best possible move by running a MiniMax algorithm. The executable requires the LabVIEW Run-Time Engine 2014 - (32-bit) available for download here: http://ftp.ni.com/support/softlib/labview/labview_runtime/2014/Windows/f2/LVRTE2014f2std_downloader.exe -
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Java CoreWars Evolver
A Java based, pMars compatible, CoreWars simulator with GA
A Java based, pMars compatible, CoreWars simulator with Genetic Algorithm warrior evolver functionality. Java 8 is needed. See [Wiki:Tutorial] -
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diggit
R package for DIGGIT algorithm
DIGGIT identify genetic variants associated with drivers of specific physiopathologic states. I computes the statistical association between the presence of genetic variants (CNV or SNP) and the activity of proteins driving physiologic or pathologic phenotype. It requires large gene expression and genetic variants datasets and depends on context-specific regulatory networks including transcriptional interactomes (usually reverse engineered by the ARACNe algorithm) and post-translational interactomes (usually generated by the MINDy algorithm). ... -
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Genetic Algorithms Engine - Blackjack
A genetic algortihm engine that evolves blackjack basic strategy.
This project is a genetic algorithm engine able to be reused for other projects with minimal additional programming. The genetic algorithm engine currently plays many blackjack hands for the fitness function and produces a result similar to blackjack basic strategy. To see it in action, download the zip file and run either: GABlackjack_Demo.exe (quick) or GABlackjack_Long.exe (slow, but it achieves better results). ... -
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Glycosylation Microviewer
An application create, simulate and adjust N-linked glycosylation.
...The model used in the application is based on two significant papers: 1.1997 Pablo Umana, James E.Bailey A Mathematical Model of N-linked Glycoform Biosynthesis. 2.2005 Frederick J.Krambeck, Michael J.Betenbaugh A Mathematical Model of N-linked Glycosylation. The application allow to simulate the network in dynamic form with various ODE solvers(Euler, Runge-Kutta etc). Genetic Algorithm is used to adjust the kinetic parameters of Michaelis-Menten equations in glycosylation reaction network. A dynamic plot is supplied to show the value of mole amout and mole fraction of various glycoform. Thanks to Alexey Balakin and Alessandro Presta. Alexey Balakin supply mathgl(https://sourceforge.net/projects/mathgl) that make the implementation of dynamic plot in this application easily. ... -
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Cyberphantom Alfa Colony
AI new tipe
This is an experimental project whose main objective is the creation of artificial intelligence (AI) new tipe. At the core of this idea is the use of special genetic algorithm that emulates the single-celled organism. The colony of such cybernetic organisms can give rise to a "reasonable" network that have a huge intellect and computing power. -
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gametes
Generate complex SNP models and heterogeneous datasets
Genetic Architecture Model Emulator for Testing and Evaluating Software (GAMETES) is an algorithm for the generation of complex single nucleotide polymorphism (SNP) models for simulated association studies. GAMETES is designed to generate epistatic models which we refer to as pure and strict, that constitute the worst-case in terms of detecting disease associations, since such associations may only be observed if all n-loci are included in the disease model. -
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quickGA-m
A quick (messy?) genetic algorithm to solve TSP
A quick genetic algorithm to solve TSP scenarios. Written in Matlab. Circa June 2012. -
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EurekaOptima is a framework for optimization containing the implementation of several algorithms like Genetic Algorithm (GA), Clonal Selection Algorithm (CLONALG), Grammatical Evolution (GE), Differential Evolution (DE), and Evolution Strategy (ES).
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ESTReMo
An evolutionary simulator of transcription regulatory networks
ESTReMo is a genetic algorithm-based simulator to explore the evolution of transcription factors and their binding motifs on realistic genomic backgrounds. -
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New CTruck3D Rally
Free-roaming 3D racing game featuring advanced terrain rendering
It's a free-roaming 3D racing game featuring advanced terrain rendering. For small file-size, a 4k x 4k terrain is available, sampled meter-by-meter so it's very smooth. Lightweight program. This is the form in which I wished to do the first release of the terrain rendering Algorithm I have developed throughout almost 2 years. Written in C++, featuring multithreading (2 threads): a total remake of the first 3D game I did years ago, CTruck3D_Simplex and sequels. This works better,... -
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Evolutionary Nursery
A simple genetic algorithm for numerical optimization
Evolutionary nursery is a result for my passion for developing genetic algorithms. I implemented this simple GA in 2008. This is especially intended for numerical optimization problems. -
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Intelligent Keyword Miner
Intelligent SEO keyword miner and predicing tool
...Programs that have similar idea are: Google AdWords, SERPWoo's Keyword Finder, Wordpot, and others. Difference is, this program is intelligent and it accepts your input data and then predicts keywords based on your likes or dislikes. As the main engine, it uses the SMOReg algorithm to analyze and map the keyword frequencies of your data. This can be a great SEO tool to help increase the traffic of any website featuring a product. -
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TrollEditor
Editor of virtual worlds.
Troll enables creation and visualisation of complex environments. It is based on Ogre3D (graphics engine), Bullet (physics engine), PhysX (physics engine), OpenAL (3D sound and music), OpenCV (image analysis and camera model) and Boost (threading and python binding). It uses Python for scripting, as well as built in simple scripting language. Some features: - built in multiplayer - incorporating data from different sensors (IMU, AHRS, Razer Hydra) - image server/client - built in support for motion capture data analysis - path finding using data from physics engine (backwave propagation algorithm) - built in XML parser - graphical world editor - plugins system (C++) -
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Grammatical Optimization
A java based framework for grammatical evolution.
This project is a result for my curiosity for how grammatical evolution (GE) works. Eventually, I made this wrapper for GE that should work with any numerical optimization algorithm. So the idea behind GE is that it takes production rules for computer programs using a context free grammar in Backus Naur form. The production rules can be used to evolve computer programs by running an algorithm such as a genetic algorithm or a particle swarm optimizer in the background. -
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mathSuite
Powerful Calculus Environment and Matrices Handling Engine
mathSuite is a very powerful Mathematical Suite which deals principally with complex algebric and geometric operations. It is powered by the fabulous ExprEval C Parser. The main purpose of this project is fast math-oriented algorithm virtualization, with an optimized direct text interface. Also it gives you a very powerful and fast Calculus Environment which let you handle easily interchangeable variable lists, matrices, LOGS and Settings Layouts with optimized Items Lists Managing Engine. You'll also be able to execute your own scriptfiles with a basic math-oriented beta script language. ...
