Search Results for "duplicates" - Page 4
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Showing 184 open source projects for "duplicates"
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Torrent Search Engine
A fast cross-platform TorrentSearch client
Torrent Search Engine: TorrentSearch is a framework and script language for searching Bit Torrent websites and search engines for torrents. -
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tag-based RNA-seq
THIS REPOSITORY HAS BEEN MOVED TO GITHUB
... to the sampling design; - adaptor trimming, quality filtering and removal of PCR duplicates; - mapping against reference transcriptome; - deriving gene counts. -
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2bRAD-GATK
THIS REPOSITORY HAS BEEN MOVED TO GITHUB
DOWNLOAD THE LATEST UPDATES FROM https://github.com/z0on/2bRAD_GATK 2bRAD is a method for cost-efficient whole-genome genotyping described in Wang et al 2012 http://www.nature.com/nmeth/journal/v9/n8/abs/nmeth.2023.html This project is about analyzing 2bRAD data using a genome reference (could be a species from the same genus). Scripts and walkthrough for: - trimming and quality filtering; - removing PCR duplicates; - mapping to genome reference; - realigning around indels... -
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2bRAD-denovo
THIS REPOSITORY HAS BEEN MOVED TO GITHUB
Download the latest updates from https://github.com/z0on/2bRAD_denovo 2bRAD is a method for cost-efficient whole-genome genotyping, described in Wang et al 2012 http://www.nature.com/nmeth/journal/v9/n8/abs/nmeth.2023.html This project is about analyzing 2bRAD data without a genome reference. Scripts and walkthroughs for: - trimming and quality filtering; - removing PCR duplicates; - assembling loci; - calling variants (SNP-wise and haplotype-wise); - recalibrating quality... -
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EZreclaim
Reclaim space taken by duplicate files
Reclaim space taken by duplicate files. With the option of Deleting or replacing duplicate files with hard links. CAUTION : MAKE SURE YOU HAVE A BACKUP OF YOUR DATA BEFORE RUNNING THIS PROGRAM. NEVER RUN AGAINST SYSTEM FILES OR FOLDERS AS YOUR SYSTEM MAY BE PERMANENTLY DAMAGED. -
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CIMS
Crosslinking induced mutation site analysis
This package includes the scripts to detect statistically reproducible crosslinking induced mutation sites (CIMS) and cross linking induced truncation sites (CITS) from HITS-CLIP data. References: Moore, M.*, Zhang, C.*, Gantman, E.C., Mele, A., Darnell, J.C., Darnell, R.B. 2014. Mapping Argonaute and conventional RNA-binding protein interactions with RNA at single-nucleotide resolution using HITS-CLIP and CIMS analysis. Nat Protocols, 9:263-293. Zhang,C.†, Darnell, R.B.† 2011.... -
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Sui Generis
An easy-to-use tool to help you find and manage duplicate files
If you keep photographs on your computer, you probably have hundreds of duplicates scattered among the many folders you use to organize them. Sui Generis scans files and folders, and organizes them into "clusters" of duplicate files. You can then designate duplicates to move into a "pen" directory, from which you may delete them, archive them or whatever. Sui Generis includes features to let you quickly select duplicates to put in the pen, as well as a way to preview files before you move... -
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Music Merge Manager
Identify duplicate songs based on track metadata (ID3, etc)
Given two trees of audio files, examine the metadata for each file to try and determine the differences in the content of the trees. This helps find duplicate songs (or non-duplicated songs) even if the music is stored in different formats. Toggles let you determine how specific the matching criteria must be: Track number and song name? Artist, album, and track length? All of the above? Ultimately this program will let you delete duplicates from either the left or right trees, or copy... -
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MethylExtract
High-Quality methylation maps and SNV calling from BS-Seq experiments
MethylExtract is a user friendly tool to generate i) high quality, whole genome methylation maps and ii) to detect sequence variation within the same sample preparation. The program is implemented into a single script and takes into account all major error sources: sequencing errors, bisulfite failure, clonal reads and single nucleotide variants. MethylExtract detects variation (SNVs – Single Nucleotide Variation) in a similar way than VarScan, a very sensitive method extensively used in... -
Digital Payments by Deluxe Payment ExchangeSave time, money and your sanity. Deluxe Payment Exchange+ (DPX+) is our integrated payments solution that streamlines and automates your accounts payable (AP) disbursements. DPX+ ensures secure payments and offers suppliers alternate ways to receive funds, including mailed checks, ACH, virtual credit cards, debit cards, or eCheck payments. By simply integrating with your existing accounting software like QuickBooks®, you’ll implement efficient payment solutions for AP with ease—without costly development fees or untimely delays.
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MusicPlayer
Music player - endlessly plays your music
This music player is supposed to be simple and all centered around an infinite intelligent queue (some other players call this PartyShuffle or DJ mode). You can manually add songs to it - but if you don't or the queue gets too short, it will automatically intelligently fill it with further songs. The intelligent queue decision currently is based on: * song ratings * context-based choices, e.g. related songs more likely Other features of this player: * open source, simplified BSD... -
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dlFindDuplicates
Find duplicate files in directories.
dlFindDuplicates finds duplicate files in selected directories, based on filelength and MD5 hashes. Duplicate files then can be selected via a lua-based scripting interface. Selected duplicates can be deleted, converted to a hardlink or moved away. dlFindDuplicates explores multithreading in order to be fast. -
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winpoolbackup
Backup many PCs to one backup drive - without waste of backup space
... less than 2^64 files. The backup drive is marked as such when containing a file named "backup-drive.txt". Whatever you rename your files to, regardless in which directory or drive or PC it is stored, the space on the backup drive will only be allocated once. No duplicates on the backup drive. For faster backup, a sha256.cache file will be stored on each drive, containing filename, size, modification time, checksum. This backup script is not for system backup, just for data files. -
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Monastic University
Software for managing Admissions, Withdrawals, Marks in Monastic Inst.
This software will help in the management of Admissions / Withdrawals of Staffs & Students & also processing of Exam Marks of all Monastic Universities. Designed with goals of Simplicity & packaged with all necessary open source tools to get you into action, straightaway. Just download the file given above, then double click to extract it to a Disk Partition, with lots of free space, & then right-click files with names starting with 1 to 8 to run them as administrator, to install the... -
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dupehasher
Shell script for managing duplicate image files in a directory.
dupehasher scans the given directory for files that are identical except by filename. dupeshasher will generate a report plaintext file named 'dupelist.txt' in the working directory (which contains, per line, tab-delimited names of files whose contents are identical). Depending upon the arguments supplied by the user upon invoking dupeshasher, it will also delete all duplicates, keeping either the oldest or newest of all sets of duplicates. Additionally it can batch-rename all remaining... -
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DupLichaSe
A Fast Duplicate File Detector with graph based semi-automatic cleaner
DupLichaSe is a very fast Duplicate File Detector that uses inductive heuristics to detect duplicate files very fast; based on content! DupLichaSe stands out from EVERY other Duplicate file detection Software because of it's graph based semi-automatic selection system. ... after finding 100s of duplicate files, do you have to go through some manual and possibly laborious process of deleting the duplicates? ...or is there a way for the Software to learn and do most of it for you in a SAFE... -
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Similar Image Search
Reverse image search your photos. Find duplicates. Find similars
Similar Image Search is a desktop reverse image search app. Think Google's "search by image" but with your own photos on your computer. SiS can search for similar images in the library and return a list of matches. I can also compare ones outside the library to ones within. It's designed for photographers to sift through a memory card dump, searching for photos in batches for ease of sorting. Requires: Java 7 -
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FS-Inspect is an easy to use tool designed to give you an overview about your files and directories (Disk Usage). On start up, it reads recursively the inspected directory and presents the content in two useful views: * The folder view, shows the directory tree, sub-folders are sorted by size. * The type view, shows all file types found, sorted by the total size. In the post scan, the utility start searching for duplicates. All duplicates are listed in the file view, colored...
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DuplicateFinder
Find duplicated files on your computer.
A small application to find duplicates on your computer, the application has a simple interface that is easy to understand, all you need to do is select the hard drive or folder and click start and the application will find the duplicates for you. Like this program? Support the developer's newest project on KickStarter: https://www.kickstarter.com/projects/1451017695/korduene-visual-programming-ide -
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Dos SQL
A query tool for file
The simple concept allows you to wright SQL statements that query the filesystems like they are tables in a database -
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RCT3 Mega Pack
This pack add's custom object and rides into your "RCT3 Platinum" game
The ULTIMATE RCT3!!!! "CTR/CS/Editor/Custom Utility/Custom Mod/Custom Stall/Creator/SID Editor Data/CTR & CS Creator Plugin/RCT3 Model/RCT3 Model Plugin/" Mass Roller Coaster Tycoon 3 Repository!!!! (100% Safe/Legal!!!) -
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Hierarchical cluster engine HCE
Hierarchical Cluster Engine project
The main idea of this project – to implement the solution that can be used to: construct custom network mesh or distributed network cluster structure with several relations types between nodes, formalize the data flow processing goes from upper node level central source point to down nodes and backward, formalize the management requests handling from multiple source points, support native reducing of multiple nodes results (aggregation, duplicates elimination, sorting and so on), internally... -
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lsdup
List files with duplicate contents
lsdup, short for "list duplicates", is a command line tool which can assist in finding and removing files with identical contents. Unlike many file deduplication tools, this has a "comparison mode" which lets you tell lsdup to "only read the files in this directory, do not consider any for duplicates... but, the files in that other directory may have duplicates, so delete (or move) any of those." lsdup also has normal deduplication, where, if given a single directory, it will sort... -
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OLBreak is a PST to MSG converter for Outlook. It supports differential conversion, duplicates filtering, automation by command-line switches and exit codes, detailed logging, invalid filesystem characters, and much more...
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A Linux/UNIX command line tool to find duplicate files. The tool supports multiple ways to consider a set of files as duplicates to each other (e.g. content, size, name ... etc.).
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Dupless - a duplicate file solution
extract unique file sets from sets with duplicates
Do you have lots of files? I do, particularly image files. There are lots of duplicates and I want to extract a unique set from the larger set. That is what dupless does. Written in Java, using sqlite, it is some simple code that solves the duplicate file problem. All of the code is contained in the .jar file, both source and binary. Currently it writes scripts for use on Linux or Windows. See the Wiki or the README.txt in the .jar file for more information.