Search Results for "written in python" - Page 23
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Showing 2430 open source projects for "written in python"
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TEES
Turku Event Extraction System
Turku Event Extraction System (TEES) is a free and open source natural language processing system developed for the extraction of events and relations from biomedical text. It is written mostly in Python, and should work in generic Unix/Linux environments. Currently, the TEES source code repository still remains on GitHub at http://jbjorne.github.com/TEES/ where there is also a wiki with more information. -
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Verlihub
NMDC Hub Server
Verlihub is a NMDC hub server that runs on all operating systems. It is written in C++ and has many rich plugins including Lua, Python and Perl. -
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Ansistrano
Ansible role to deploy scripting applications like PHP, Python, Ruby
Ansistrano is an Ansible Galaxy role to easily deploy and roll back your scripting applications written in PHP, Python, NodeJS, or Ruby. Ansible is a powerful open-source tool for configuring and provisioning servers. Ansistrano leverages all its power to deploy applications. Ansistrano uses a folder structure in your servers that simplify rollbacking: a soft link change, an application reload, and done! We support deploying by pulling your code from CVS (Git, Mercurial, or Subversion), downloading from the repository (S3, or ZIP file), or pushing (Copying or Rsyncing). ... -
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Strider
Open Source Continuous Integration & Deployment Server
Strider is an Open Source Continuous Deployment / Continuous Integration platform written in Node.js and Ember.js, with MongoDB as a backing store. Strider is designed to be easy to set up and use, with reasonable defaults and automation and minimal extraneous UI. It is also extremely customizable through plugins, which allows it to add hooks for performing arbitrary actions during build, modify the database schema, create or modify user interfaces, and so much more! Strider comes with a... -
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PyCosmic is a tool to detect and clean single images from the disturbing cosmic ray hits. It was designed and tested specifically for CALIFA and other fiber-fed integral-field spectroscopy dataset. It is written in Python and can be executed from the command line. New release is version v0.5. Updated to be compatible with numpy version 1.12. New release is version v0.4. It's now compatible with astropy for fits I/O and computation time is reduced by a factor of 2.
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joe
A .gitignore magician in your command line
A .gitignore magician in your command line. Joe generates .gitignore files from the command line for you. After install, make sure to run joe u. This will download all .gitignore files in ~/joe-data/ folder. Download the latest binary from the Releases page. It's the easiest way to get started with joe. Make sure to add the location of the binary to your $PATH. You can also use joe to append to a global .gitignore. These can be helpful when you want to ignore files generated by an IDE, OS,... -
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Tessera
A dashboard front-end for graphite.
...Tessera is initially focused on information presentation - it does not NOT address the areas of metric discovery or query composition (although it may in the future). Tessera consists of a small python webserver written with Flask with a SQL backing store. The server manages storing and searching for dashboards, managing tags for organization, serving the basic UI assets, and providing a ReST API for the front-end to use. -
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mediaTUM is free software written in Python for archiving and retrieval of images, documents and other research data. It was originally developed in the framework of the DFG project IntegraTUM and is continuously expanded with new functionalities as required.
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IOA AM code
Implementation of the core routine for AM analysis from the IOA AMWG
The UK Institute of Acoustics (IOA) amplitude modulation working group (AMWG) has developed a method for analysing and rating AM. This has been produced as an example of an implementation of the routine described in the IOA AMWG report. It is written in the Python language which is freely available. V1.5 is compiled for Windows (XP onwards). The responsibility for the correct implementation and application of the software or any modification thereof rests with the end user. It should not be taken as agreement from the IOA or the AMWG that any results produced by this code are recommended or agreed. ... -
Grafana: The open and composable observability platformGrafana is the open source analytics & monitoring solution for every database.
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katana is the new hacking framework written in python for making penetration testing.
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ImReP
Immune repertoire assembly from RNA-Seq data
ImReP is a tool written in Python programming language (version 2.7) which is designed to assemble CDR3 region sequences from RNA- or TCR-(BCR-)-Seq reads (either single- or paired-end) and provide immune repertoire as a set of clonotypes with their counts. -
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CSV-O-MATIC
CSV editing
You can use this program to create and edit CSV files. It excels at loading huge files, because it only displays a grid of what you need to see, instead of the entire file. -
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Neoformat
A (Neo)vim plugin for formatting code
Neoformat uses a variety of formatters for many filetypes. Currently, Neoformat will run a formatter using the current buffer data, and on success, it will update the current buffer with the formatted text. On a formatter failure, Neoformat will try the next formatter defined for the filetype. By using getbufline() to read from the current buffer instead of file, Neoformat is able to format your buffer without you having to :w your file first. Also, by using setline(), marks, jumps, etc. are... -
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Parse C++ header files using ply.lex to generate navigable class tree representing the class structure. CppHeaderParser.py has the advantage of being a pure python C++ header parser. Grap a copy of ply at http://www.dabeaz.com/ply/
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OhodO
OhodO optical marks recogination
OhodO is optical marks recogination, written by python 3.6, opencv 3, tkinter. work with webcam of the laptop or usb webcam. -
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Ubutnu App Center
Software Center
Ubuntu Software Center or simply Software Center was a high-level graphical front end for the APT/dpkg package management system. It was free software written in Python, PyQt based on Qt4. -
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This is a working toolkit for building a simulation of a star cluster. NBody itself is written in C, it's visualization software is in Python. Please see the readme for more information.
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AmpliMethProfiler
CpG methylation analysis of amplicons from bisulfite sequencing
...Specifically, ampliMethProfiler provides an easy and user friendly way to extract and analyze the epiallelic composition of reads from targeted bisulfite sequencing experiments. ampliMethProfiler is written in python language and requires a local installation of BLAST and QIIME tools. It can be run on Linux and OS X platforms. HOW TO CITE US: "ampliMethProfiler: a pipeline for the analysis of CpG methylation profiles of targeted deep bisulfite sequenced amplicons". Scala G., et al. BMC Bioinformatics (2016) 17:484, DOI: 10.1186/s12859-016-1380-3 -
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LeapFrog Optimizer
Open Source Optimizing Algorithm Written in Python
name: leap frog optimizer version: 0.5 ALPHA author: Mark Redd email: redddogjr@gmail.com written for python version: 2 optimizer algorithm website: http://www.r3eda.com/ about: This optimizer was written based on the algorithm published by Dr. R. Russell Rhinehart. A full explanation of the algorithm can be found at the following URL: http://www.r3eda.com/leapfrogging-optimization-algorithm/ The following are "key references" published on the optimization website explaining the technique: - Rhinehart, R. ... -
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...It includes harmonic normal coordinate analysis, vibrational perturbation theory and vibrational configuration interaction (VCI) algorithms, with VCI matrix elements chosen iteratively according to VPT2 energy contributions, across a range of significance thresholds. It is implemented primarily in Python for accessibility but with time-consuming routines written in C (produced using Cython). Force fields for use with this program package may be obtained from the extensible PyPES library of high quality analytical potential energy surfaces (http://sourceforge.net/projects/pypes-lib-ext).
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Gene-Environment iNteraction Simulator 2
A tool able to simulate gene-environment and gene-gene interactions.
...The GENS2 tool is able to simulate gene-environment and gene-gene interactions. To make the Simulator more intuitive, the input parameters are expressed as standard epidemiological quantities. GENS2 is written in Python language and takes advantage of operators and modules provided by the simuPOP simulation environment. It can be used through a graphical or a command-line interface. -
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Linux Bash Made Simple
Based on Python 3
This tool is designed to help Linux beginners to work with Linux Bash easily. It is written in Python 3. The default username is "tux" The default password is "linux" -
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CWOnly
Python program for sending custom CW macros via serial port
This is a project I started to learn Python and Tkinter. It all started when I received a PI for Christmas in 2015. Over Christmas breaks I have time away from work to play on projects and I have taken an interest in programming. There are many fine ham radio programs out there. This is just a learning tool. The code was written in Python2.7 and bundled with Pyinstaller. -
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OneMoreShot
Allows for replaying of the RPG game Oneshot.
This utility allows for replaying and experimentation of the RPG game Oneshot. THIS MUST BE RUN WITH ADMIN PRIVELEGES! -
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qSoftwareCenter
high-level graphical front end for the APT
qSoftwareCenter (Qt4 Software Center) or simply Software Center was a high-level graphical front end for the APT/dpkg package management system. It was free software written in Python, PyQT based on Qt4.
