DNAcompact
Genome compression algorithm with/without reference (Linux/Windows)
As the technique of acquiring genome sequences advances, the storage and data transferring of large genome data are becoming important concerns for biomedical researchers. We propose a two pass genome compression algorithm, which highlights the synthesis of complementary contextual models and the introduction of logistic regression mixture method, to improve the compression performance. The proposed framework handles genome compression with and without reference seque- nces, and demonstrated...