Showing 119 open source projects for "drug"

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  • 1
    Snapshot Demo

    Snapshot Demo

    Snapshot models the genes and reactions within human cells

    Snapshot is a poly-omics model of the human cell allowing you to edit genes and see how it affects cell functionality and what diseases might arise. The full Genome scale metabolic model consists of the following: 92 Genes 53 Reactions 109 Metabolites 3 Cellular Compartments 7 Diseases Which can be found here for only £2!: https://www.scarboroughbiotech.com/ Note demo version is a much smaller genome scale model.
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  • 2

    OpenGrowth

    OpenGrowth is a program which constructs de novo ligands for proteins.

    OpenGrowth is a research program which grows new ligands in proteins by connecting small organic fragments. The details can be found in the original publication "OpenGrowth: an automated and rational algorithm for finding new protein ligands" (J. Med. Chem., http://dx.doi.org/10.1021/acs.jmedchem.5b00886). To use OpenGrowth, you will need OpenGrowth_1.0.zip and Resources_1.0.2.zip that can be found by clicking on the Files menu in the horizontal bar at the top...
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  • 3

    gaussianfinder

    Cavity Detection Program

    Protein cavities play a key role in biomolecular recognition and function, particularly in protein-ligand interactions, as usual in drug discovery and design. Grid-based cavity detection methods aim at finding cavities as aggregates of grid nodes outside the molecule, under the condition that such cavities are bracketed by nodes on the molecule surface along a set of directions (not necessarily aligned with coordinate axes). Therefore, these methods are sensitive to scanning directions...
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  • 4
    Nuvarator

    Nuvarator

    A SNV Detection Software Tools Installer Package

    ... available to researchers interested in evolutionary biology, and hence lays the foundation for predicting disease susceptibility and drug response. It a GUI based software having an automated, easy to use user interface designed in shell script. It is available online at https://sourceforge.net/projects/Nuvarator It is open source and also includes a user manual which aids the user in its installation.
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  • 5

    BEMoDA

    Dissolution profile comparison Model Dependent-Independent Approach

    Dissolution profile comparison (Biowaiver aid) Model Dependent-Independent Approach scripts for in-vitro dissolution profile comparison as proposed by Sathe et al. in 1996 (Sathe PM, Tsong Y, Shah VP. In-vitro dissolution profile comparison: statistics and analysis, model dependent approach. Pharm Res. 1996 Dec;13(12):1799-803) and Tsong et al. in 1996 (Tsong Y, Hammerstrom T, Sathe P, Shah VP. (1996) Statistical Assessment of Mean Differences between Two Dissolution Data Sets, Drug Info. J. 30...
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  • 6

    BioPPSy

    A biochemical property prediction system

    Computationally predicts the pharmacokinetic properties of drug candidates using Quantitative Structure Property Relationships (QSPR) modelling. Assembles a set of tools and databases for predicting the physical properties of small molecules. The program models a given property's dependence on a collection of molecular and structural descriptors using a training set of molecules. Neural networks and support vector regression are available, as well as linear models. The models generated...
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  • 7

    Dr Assistant

    Prescription writing and patient management software in Java,JavaFX

    Dr Assistant is designed for doctor to write and print prescription shortly, keep patient's history drug uses and so more. Dr.Assistant is developed with JavaFX and SQLite so user don't need to worry about database. i build an exe file for windows user and successfully test it on windows 10 x64 and x84 bit version. source code ; https://github.com/kmrifat/Dr-Assistant Thank you
    Downloads: 1 This Week
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  • 8
    We developed a systematic algorithmic solution for quantitative drug sensitivity scoring (DSS), based on continuous modeling and integration of multiple dose-response relationships in high-throughput compound testing studies. License: The DSS R-package is made available under the terms of the GNU General Public License, which means that the source code is freely available for use within other software, but if you alter the code and distribute it, you must make the new source code freely...
    Downloads: 2 This Week
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  • 9

    Kinetic Model Builder

    GUI for building, simulating and optimizing kinetic models.

    .../EigenLab). Convenient simulation and summarization across 2-dimensional sets of stimulus conditions makes constructing stimulus-response curves incredibly simple. For ion channels, this is useful for simulating dose-response or current-voltage curves both with and without a secondary stimulus (e.g. some drug). A series of video tutorials are available at https://www.youtube.com/watch?v=7I2XPkdOvCg&list=PL-J_lULjiFsCPL2pkz8_tFe_aJ4Fc8a8k&index=1.
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    Claims Processing solution for healthcare practitioners.

    Very easy to use for medical, dental and therapy offices.

    Speedy Claims became the top CMS-1500 Software by providing the best customer service imaginable to our thousands of clients all over America. Medical billing isn't the kind of thing most people get excited about - it is just a tedious task you have to do. But while it will never be a fun task, it doesn't have to be as difficult or time consumimg as it is now. With Speedy Claims CMS-1500 software you can get the job done quickly and easily, allowing you to focus on the things you love about your job, like helping patients. With a simple interface, powerful features to eliminate repetitive work, and unrivaled customer support, it's simply the best HCFA 1500 software available on the market. A powerful built-in error checking helps ensure your HCFA 1500 form is complete and correctly filled out, preventing CMS-1500 claims from being denied.
  • 10

    syngen

    R package for inferring drug synergy interactions

    The syngen package infer drug synergistic interactions by comparing each drug MOA, as inferred by the VIPER algorithm, with the Master Regulators of a defined phenotype
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  • 11

    Drug Interaction Prediction

    This includes the data and results obtained in this project

    Data: Used data for inferring drug-drug interactions Results: Predicted positive and negative drug-drug interactions
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  • 12

    MedConsult

    Medical Consultation & Electronic Medical Records Software

    MedConsult is a free Medical Outpatient Consultation & Electronic Medical Records Software. MedConsult is designed to manage the medical consultation all the way through from recording basic observations to issuing of prescriptions, sick leave or referral notes. Medicines are prescribed easily and MedConsult manages the dose, frequency, duration and route of administration of a drug automatically based on patient age group and nature of medicine. MedConsult also places Past Medical History...
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  • 13
    Combenefit

    Combenefit

    Synergy analyses of drug and other other agent combinations

    Combenefit software is a standalone application for Windows that performs surface analyses of drug and other agent combinations to identify synergy. Please cite as: "Di Veroli,G.Y. et al. (2016) Combenefit: an interactive platform for the analysis and visualization of drug combinations. Bioinformatics." (http://bioinformatics.oxfordjournals.org/content/early/2016/05/27/bioinformatics.btw230.abstract) Current version (2.021): https://sourceforge.net/projects/combenefit/files/Combenefit...
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    Downloads: 107 This Week
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  • 14
    .... In case you use the package in your work, we do appreciate a citation to the publications below. Citation: Yadav B, Peddinti G, Pemovska T, Khan SA, Szwajda A, Tang J, Wennerberg K and Aittokallio T. From drug response profiling to target addiction scoring in cancer cell models. (Submitted)
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  • 15

    Drug Extraction

    Drug name extraction

    Drug name recognition and normalisation/grounding to DrugBank ids and standard names. Package provides 2 taggers: 1. DrugTagger - CRF-based with DrugBank presence feature (see feature set for details). 2. DrugnameGazetteer - gazetteer/dictionary-based. Dictionary created from DrugBank.ca database. Both taggers include grounding/normalisation to DrugBank ids and standard names. Feature set: Word, Word-1, Word+1, Word-1_Word, Word_Word+1, DrugBankPresence, POS DrugBankPresence feature...
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  • 16

    Health Care Management System

    Health care management and reporting.

    This software will be used to manage hospitals (patient registration, drug management), and provide reporting capabilities which will enable decision makers to take proper and swift actions; especially with regards to outbreaks and drug mismanagement.
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  • 17

    DrugNET

    The Hub for the analysis of pharmacogenomic data

    DrugNET is a computational platform for drug response prediction and a web-application to test and compare different predictive algorithms.
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  • 19
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  • 20
    The Protein Similarity Network

    The Protein Similarity Network

    Human protein similarity network used to predict drug safety.

    This is the protein similarity network - PSIN. Here, the nodes are human proteins and they are linked only if they share considerable sequence similarity. We found that this network is particularly useful to distinguish approved from problematic drug-targets. Here you also find the complete set of programs and datasets we used for this purpose. Free to help further test and develop this project. Your help and expertise are much appreciated ! If you have any questions, please do...
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  • 21
    It is a drug calculator. It is useful to pharmacists and doctors. You inform data and the app give to you the exact dose of a drug to this patient.
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  • 22
    Neuron EHR Tool Kit

    Neuron EHR Tool Kit

    Web based EHR and tools using a smart longitudinal patient record.

    After 4 years of development and production use, the clinical modules created by Roberts-Hoffman were bundled together and released to the healthcare community under the GPL free software license. The objectives of the Neuron project are to demonstrate that open source software is viable for healthcare, to build better systems that are accessible to healthcare providers, and to contribute to the open source communities that make these types of projects possible. The Neuron EHR Tool Kit...
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  • 23
    Ponte
    ... of clinical care information systems with clinical research information systems and drug and disease knowledge databases, as well as the appliance of advanced data mining techniques and enhanced learning algorithms.
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  • 24

    bayescount

    The bayescount R package

    A set of functions to allow analysis of count data (such as faecal egg count data) using Bayesian MCMC methods. Returns information on the possible values for mean count, coefficient of variation and zero inflation (true prevalence) present in the data. A complete faecal egg count reduction test (FECRT) model is implemented, which returns inference on the true efficacy of the drug from the pre- and post-treatment data provided, using non-parametric bootstrapping as well as using Bayesian MCMC...
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  • 25
    HHS Digital Media API Platform

    HHS Digital Media API Platform

    Syndicate text and multimedia content with this API and storefront.

    ...) and the Department of Health and Human Services (HHS) Assistant Secretary for Public Affairs office (ASPA) developed these APIs in collaboration with the Food and Drug Administration’s (FDA) Center for Tobacco Products (CTP). The CDC, FDA/CTP, HHS/ASPA, and the National Institute of Health’s National Institute for Allergy and Infectious Diseases (NIH/NIAID) use these platforms. https://syndication.hhs.gov http://tools.cdc.gov http://tools.niaid.nih.gov http://tools.fda.gov
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